Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crocodylus_20porosus_20[refseq_20GCF_5F001723895.1_202016-09-13] 70 sequences; 2,049,536,252 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq21 100 3e-16 seq33 89.7 6e-13 >seq21 Length=203625132 Score = 100 bits (110), Expect = 3e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||| ||||| || || || |||||||| |||||||| |||||||| |||||| Sbjct 200397297 TCCCAGACTGAGACCGGTACCCCTTATATGCTGTACAAGGACTCTTGTAACCGGAAGAGC 200397238 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| |||| |||| || |||||| || || || ||||||||||| | |||||| Sbjct 200397237 AACCAGCAGAACCTGGGCACCATCAAGTGCAGCAACCTGTGCACGGAAATAGTGGAGTAC 200397178 Query 76016 ACAGATAAGGATGAG 76030 || || |||||| Sbjct 200397177 ACCAGCAAAGATGAG 200397163 >seq33 Length=109106476 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 65441 AGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGA 65500 |||||||||||||||||||||| |||||| ||||| || ||||| ||||||||||||| Sbjct 25981030 AGAATCCATTTGACTTTATGGAGAACATTTCACTTGAAGGCAAGACAAACTTCTTTGAGA 25980971 Query 65501 AGCGAGTTGGGGACTAT 65517 || |||| || || ||| Sbjct 25980970 AGAGAGTAGGCGAATAT 25980954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569078001600