Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crocodylus_20porosus_20[refseq_20GCF_5F001723895.1_202016-09-13] 70 sequences; 2,049,536,252 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq33 84.2 4e-11 >seq33 Length=109106476 Score = 84.2 bits (92), Expect = 4e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 39168 TCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCA 39227 |||||| |||||| | ||| |||||||||||||| || || | |||||| || |||||| Sbjct 25982287 TCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTCAACCAAAAAATGGATGCA 25982346 Query 39228 AAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCTATTA 39273 ||| | ||||||||| || || ||||| ||||| |||| || Sbjct 25982347 AAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCTACTA 25982392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135208006000