Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crocodylus_20porosus_20[refseq_20GCF_5F001723895.1_202016-09-13] 70 sequences; 2,049,536,252 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 >seq1 Length=270692262 Score = 100 bits (110), Expect = 2e-16 Identities = 116/154 (75%), Gaps = 8/154 (5%) Strand=Plus/Plus Query 111787 TGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCC 111846 || |||||||| || ||||| || ||||| ||||| || || ||||| ||||| ||| Sbjct 186506149 TGAGCAATCATATACGTGAGCAGTGAATAACTGGCAATATTGAAAGGCACTCCTAGTCCC 186506208 Query 111847 ATATCTCCCGATCTTTGATATAGCTGACATGATAGTT---TATTTTGTGAC-ACATAAAA 111902 |||||||| ||||| ||||| ||||| || || || | |||| || ||||| || Sbjct 186506209 ATATCTCCAGATCTCTGATACAGCTGGCAAGAAAGCTCGCCATTT----ACAACATAGAA 186506264 Query 111903 TTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 ||| || || |||||||||| || || |||||| Sbjct 186506265 TTGGCAGAGAGCATGACAAGGGGGTAAAGCCATC 186506298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391945265621410