Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21] 186,068 sequences; 1,520,334,138 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1118 111 1e-19 >seq1118 Length=41628 Score = 111 bits (122), Expect = 1e-19 Identities = 125/166 (75%), Gaps = 1/166 (1%) Strand=Plus/Plus Query 18971 AATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATC 19030 ||||| || |||||||| || | | || ||||||||| || |||||| ||| | || Sbjct 14322 AATGGCTCTGCCTCCATGCCATGCTCTCTGCCAGTTTTACATTTTAAACGGCGAACTCTC 14381 Query 19031 CTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGG 19090 || || |||| ||| | || || || ||||| || || |||||||||||||| ||| | Sbjct 14382 TTGTCAGCTATATCAGCGTTCTGGAGACATGGGACTGGGCGTACCGTTCAACATAGCTAG 14441 Query 19091 ATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAA 19136 ||| |||||||||| | || | || ||||||||||| |||||| Sbjct 14442 TTATTCACTTCTTACTTCAATGATTGCCCATGTTACAGG-CTTAAA 14486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398598043281060