Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21] 186,068 sequences; 1,520,334,138 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1118 109 4e-19 >seq1118 Length=41628 Score = 109 bits (120), Expect = 4e-19 Identities = 123/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 20400 AATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTC 20459 ||||||| |||||||||| ||| || ||||| |||||| || || ||| | || Sbjct 14322 AATGGCTCTGCCTCCATGCCATGCTCTCTGCCAGTTTTACATTTTAAACGGCGAACTCTC 14381 Query 20460 GTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAG 20519 ||||| | ||||| || || | || ||||||||||| || || ||||| || || || Sbjct 14382 TTGTCAGCTATATCAGCGTTCTGGAGACATGGGACTGGGCGTACCGTTCAACATAGCTAG 14441 Query 20520 TTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564 |||| | || ||||| | |||||||| |||||||||| ||||| Sbjct 14442 TTATTCACTTCTTACTTCAATGATTGCCCATGTTACAGGCTTAAA 14486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398278768946260