Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21] 186,068 sequences; 1,520,334,138 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq7215 113 5e-20 >seq7215 Length=34700 Score = 113 bits (124), Expect = 5e-20 Identities = 114/147 (78%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 21487 ACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAA 21546 |||| || |||| |||| ||||| || | ||||||||||| || | || ||||| | Sbjct 16578 ACAAATCATACCT-CATCTCTACTAATCAGCTCATTAGAAAAAGTAAGTCCAGGCATCAG 16636 Query 21547 TCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAAC 21606 |||| || |||| |||||||||||| ||||| | || |||||||| || || ||||| Sbjct 16637 ACCTCGTTTCTTTAGCCAAAATATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCAAC 16696 Query 21607 GGCAGCAAATGCAACTAATCGTTCACC 21633 ||||||||||| |||| |||||||| Sbjct 16697 TGCAGCAAATGCTACTACACGTTCACC 16723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530663678524320