Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21] 186,068 sequences; 1,520,334,138 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq7215 100 7e-16 >seq7215 Length=34700 Score = 100 bits (110), Expect = 7e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548 |||||| | | |||||||||| |||||||| || ||||||||||| | ||| || Sbjct 16720 GAACGTGTAGTAGCATTTGCTGCAGTTGAAGGAATCTTCTTTTCTGGCTCTTTTGCATCA 16661 Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608 || ||||||||||| ||||| | | ||||| || || || ||||| |||||| | ||| Sbjct 16660 ATATTTTGGCTAAAGAAACGAGGTCTGATGCCTGGACTTACTTTTTCTAATGAGCTGATT 16601 Query 22609 AGCCGAGATGAGG 22621 || ||||||||| Sbjct 16600 AGTAGAGATGAGG 16588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1300246409905176