Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21] 186,068 sequences; 1,520,334,138 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq589 414 7e-110 seq59098 104 2e-16 seq21484 98.7 7e-15 seq39890 96.9 3e-14 seq42107 91.5 1e-12 seq2518 91.5 1e-12 seq97270 89.7 4e-12 seq96998 89.7 4e-12 seq33583 89.7 4e-12 seq23496 89.7 4e-12 seq12740 87.8 1e-11 seq99519 86.0 5e-11 seq55457 86.0 5e-11 >seq589 Length=133378 Score = 414 bits (458), Expect = 7e-110 Identities = 981/1463 (67%), Gaps = 28/1463 (2%) Strand=Plus/Minus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 |||||| || ||||| || || ||| ||| || || | ||||| ||||| || Sbjct 69972 ATTAGTTATTGTAATCTTATTCTCTTTTCCTGTGCTCTTGTCCACTGCAGTAACATTGAG 69913 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 |||||||| ||||| | |||||||| || |||||||| || || || | | ||||| Sbjct 69912 GATACCATTTGCATCAATGTCAAATGTCACCTCAATTTGGGGCACACCACGAGGTGCAGG 69853 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 ||| || || || | ||| | ||||| ||||| || ||||| | || || Sbjct 69852 TGGAATACCCGTCAGGTCAAACTTGCCCAGCAGGTTATTGTCCTTAGTCATGGCTCTCTC 69793 Query 281560 ACCCTCGAAAATTTGGAT-AGTA-ACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 281617 |||||| | | ||| | || | ||||| | || || |||||||| || || || | Sbjct 69792 ACCCTCATACACTTGTACCAGCACACTAC--TCTGGTTGTCTGAATAGGTGGTGAAGG-T 69736 Query 281618 CTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 281676 |||| ||| || ||||| |||||||| | | || | ||||| | |||||| Sbjct 69735 CTGGGTTTGCTTGGTGGGAATAGTTGTGTTACGTTTGATTAAGGCAGTCATCACACCACC 69676 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 281736 ||| || || | ||| |||||||| || | ||||||| || | || | ||| | || Sbjct 69675 AGCAGTCTCAATACCCAGAGAAAGTGGTGCTACATCAAGCAGCAGAAGGTCTTGCACATT 69616 Query 281737 TTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 ||| | | ||| | |||||||| || || | ||||||||||||||| |||||||| Sbjct 69615 TTCGGATTTGTCACCCATTAGAATAGCAGCCTGCACAGCAGCACCATATGCCACAGCTTC 69556 Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTC 281855 ||||||||| | ||| ||||| | ||| ||||| || || | ||| | || || | Sbjct 69555 ATCAGGATTTATGCTTTTGTTTAGCTCTTTTCCATTAAAGAAGTCTTGGAGCAACTT-TT 69497 Query 281856 TTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 281915 | ||| || ||||||| ||| || ||||| | |||||||||| | ||| ||| | Sbjct 69496 GGATCTTGGGGATACGAGTTGAGCCACCAACCAGAACAATTTCATTAATTTGTCCTTTGT 69437 Query 281916 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTG 281975 | || || | ||| | | | || || || ||||||||| | | | || | || | Sbjct 69436 CTAGCTTAGCATCACGAAGAGCCTTCTCCACAGGTTCAAGAGTACCACGGAAGAGATCAG 69377 Query 281976 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TA-TAATCAATTCCTTCGAA 282033 | || || || || ||| | |||| | ||| | || ||||||| || || || Sbjct 69376 CATTGAGCTCCTCAAAGCGAGCACGAGTA--ATTGATGTGTAGAAATCAATGCCATCAAA 69319 Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093 || || |||| ||||| | || || || || ||| || | |||||| || | ||| Sbjct 69318 TAATGAGTCAATCTCAATAGAAGCCTGGGTGGAGGAACTCAGGGTACGTTTGGCTCTTTC 69259 Query 282094 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATAT 282151 ||| ||||| | || | ||| | || | ||| ||| | | || |||| Sbjct 69258 ACAGGCTGTGCGGAGCCGTCGAACTGC--TCGCTTGTTGCCAGCAATGTCACGCTTATGC 69201 Query 282152 TTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAAATCTTCACCTC 282209 || | |||||| || || |||| ||| | || | ||||| ||||| || || || | Sbjct 69200 TTGCGCTTGAATTCCTC--CACAAAATGGCTCACCATGCGATTGTCAAAGTCCTCCCCAC 69143 Query 282210 CCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAA 282269 |||| | |||| ||| | |||| | | |||| || | |||||||||| || ||||| Sbjct 69142 CCAAATGGGTATCTCCAGCAGTAGATTTCACTTCAAAGATGCCATCTTCAATAGTCAAAA 69083 Query 282270 GAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT------TTCTT 282323 | ||||||| || |||||||||| ||||| || || |||||| | | || Sbjct 69082 TGGAAACATCAAATGTGCCACCACCCAAGTCAAAGATCAGCACATTCTTCTCACCTGCTC 69023 Query 282324 TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTC 282383 || |||||||| | |||||| |||| |||||||| || || |||||||| || | Sbjct 69022 TGCTCCCTTTTTTATCCAAACCATAGGCAATGGCAGCAGCCGTGGGCTCATTAATGATGC 68963 Query 282384 TCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGT 282443 ||| ||||| ||||| | ||| | || |||||||| |||||||| | ||| || || | Sbjct 68962 GCAATACATTGAGACCTGTAATGGTACCGGCATCTTTGGTGGCTTGGCGTTGGGAGTCAT 68903 Query 282444 TAAAATATGCAGGAACAGTAATAACGGCA-TCTGTTACTTCTTTTCCAATATAAGCGCTT 282502 | || |||||||| |||||||| || ||| |||| |||| || | ||||| Sbjct 68902 TGAAGTATGCAGGTACAGTAATTACAGCACTCTG-GACTTTGCAACCCAGGTAAGCCTCA 68844 Query 282503 GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTG 282562 ||| ||| |||||||| | || | ||| || ||||||| ||| ||| | | |||| Sbjct 68843 GCTATTTCCTTCATTTTGGTCAATACCATAGAGGAAATTTCTTCAGGAAAGAAGGTCTTG 68784 Query 282563 GATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAAT 282622 ||| | ||| |||| | | || || | | || | | || || Sbjct 68783 ATCTCACACTTATACTCGACTTGTACCTTGGGCTTCCCAGCTTCACTCACCACACGGAAA 68724 Query 282623 GGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGT 282682 ||||| | |||||||| || || || | ||||| ||| | | ||||| | || Sbjct 68723 GGCCAGTGCTTCATATCGGACTGCACCGTAGAGTCATCAAATTTGCGGCCAATGAGACGC 68664 Query 282683 TTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCA 282742 || |||||||| || || ||| | ||||| | || |||||| |||||||||||||| Sbjct 68663 TTGGCATCAAAGATGGTGTTGTTGGGATTCATAGCCACTTGATTCTTGGCTGCATCTCCG 68604 Query 282743 ATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCA 282802 || || |||| || || ||||| | |||||| || || ||||| || ||||| || Sbjct 68603 ATGAGGCGTTCAGTGTCCGTAAAGGCAACATAGCTCGGTGTAGTGCGGTTGCCTTGGTCG 68544 Query 282803 TTCGCAATAATTTCAACTTTACC 282825 || || ||||| || ||||| || Sbjct 68543 TTGGCGATAATCTCCACTTTCCC 68521 >seq59098 Length=8879 Score = 104 bits (114), Expect = 2e-16 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 |||||||| ||||||||||||| || || || || ||||| || || || | | |||| Sbjct 1858 TTTTTATCCAGACCATACGCAATGGCTGCTGCGGTGGGTTCGTTGATGATGCGAAGAACA 1917 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || || |||||||| | || |||||||| || ||||| | || || ||||||||||| Sbjct 1918 TTCAGGCCAGCAATGGTGCCAGCATCTTTGGTAGCTTGCCGCTGAGAGTCGTTAAAATAA 1977 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 || || || || || || |||| Sbjct 1978 GCTGGGACTGTGATTACTGCAT 1999 >seq21484 Length=40370 Score = 98.7 bits (108), Expect = 7e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | || || |||| ||||| || ||||| ||||||||||||| | ||| Sbjct 38874 TTTTTGTCCAAGCCGTAAGCAATTGCAGCTGCGGTTGGCTCATTAATAATTCGGAGCACA 38933 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || ||||||||||| |||| |||||||| || || || | || || || || ||||| Sbjct 38934 TTGAGACCAGCAATGGTTCCGGCATCTTTTGTAGCCTGACGCTGGGAGTCATTGAAATAA 38993 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTAC 282480 || || || || | ||||||| ||| || Sbjct 38994 GCTGGGACTGTGACCACGGCATTTGTAAC 39022 >seq39890 Length=6593 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 400294 AAATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTT 400353 || || || || ||||||||||| |||||||||||||| ||| | ||| | ||||||||| Sbjct 709 AACTGCACGCTCATTTTGACAGAAGGAGATTCAGCTAAGACACTAGCTGTTTCTGGCCTT 650 Query 400354 AATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTT 400413 ||| | || || || | | |||||| || ||||| ||||||||||| |||| || Sbjct 649 GGAGTTGTGGGTAGGGACAAATTTGGAGTATTTCCACTGCGAGGAAAACTTCTGAACGTA 590 Query 400414 AGGGATGC 400421 |||| || Sbjct 589 CGGGAAGC 582 >seq42107 Length=6176 Score = 91.5 bits (100), Expect = 1e-12 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 ||||| ||||||| || ||||||||||| || ||| | || ||| | ||||| | | Sbjct 3276 TGTACGTTAATTTTAACTGAGGGAGATTCTGCCAAATCTTTAGCTGTCTCTGGTTTGGGT 3335 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 ||||||||||||||| ||||| || || ||||| || |||||| || | |||||| | Sbjct 3336 GTTATTGGAAGAGATAGATATGGGGTATTTCCACTCAGGGGAAAAATTCTTAATGTTCGT 3395 Query 400417 GATGC 400421 || || Sbjct 3396 GAGGC 3400 >seq2518 Length=64716 Score = 91.5 bits (100), Expect = 1e-12 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 ||||| ||||||| || ||||||||||| || ||| | || ||| | ||||| | | Sbjct 58460 TGTACATTAATTTTAACTGAGGGAGATTCTGCCAAATCTTTAGCTGTCTCTGGTTTAGGT 58401 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 ||||||||||||||| ||||| ||||| ||||| || |||||| || | || ||| | Sbjct 58400 GTTATTGGAAGAGATAGATATGGGGTTTTTCCACTCAGGGGAAAAATTCTTAACGTTCGT 58341 Query 400417 GATGC 400421 || || Sbjct 58340 GAGGC 58336 >seq97270 Length=1937 Score = 89.7 bits (98), Expect = 4e-12 Identities = 135/192 (70%), Gaps = 9/192 (5%) Strand=Plus/Plus Query 1079027 AAGAATCATTGAATTAGAAACGTATCCAAAATTTTCGTATTGTTTCATTGCACACGACAA 1079086 ||| | ||| ||||||| || | |||| | ||| | |||||| ||| | || || Sbjct 1261 AAGTAGCATAGAATTAGTGACTTGTCCATACAATTCCTGTTGTTTTGCAGCATAGGATAA 1320 Query 1079087 ATTAATCAAATTCCAAGCAATAATTCCGGGTCTACCATTAAAAAACAGTTTCAAATCA-- 1079144 |||||||||| |||| | | |||||| |||| ||||||||||||| ||| |||||| Sbjct 1321 ATTAATCAAAGTCCATCCTACAATTCCAGGTCGGCCATTAAAAAACAATTTGAAATCAAA 1380 Query 1079145 ----GTTCCAAATATTTCAGGATTAAATTCAATACCCATAACAATATCATAAAATAATTT 1079200 |||| || | |||||||||||||| ||||| | | | ||| || || || Sbjct 1381 CCACTTTCCCAAGCGT---GGATTAAATTCAATTCCCATCATGAAGTTATAGAAGAAATT 1437 Query 1079201 TCCTGTAAATTT 1079212 || || ||||| Sbjct 1438 GCCAGTGAATTT 1449 >seq96998 Length=1944 Score = 89.7 bits (98), Expect = 4e-12 Identities = 135/192 (70%), Gaps = 9/192 (5%) Strand=Plus/Plus Query 1079027 AAGAATCATTGAATTAGAAACGTATCCAAAATTTTCGTATTGTTTCATTGCACACGACAA 1079086 ||| | ||| ||||||| || | |||| | ||| | |||||| ||| | || || Sbjct 1268 AAGTAGCATAGAATTAGTGACTTGTCCATACAATTCCTGTTGTTTTGCAGCATAGGATAA 1327 Query 1079087 ATTAATCAAATTCCAAGCAATAATTCCGGGTCTACCATTAAAAAACAGTTTCAAATCA-- 1079144 |||||||||| |||| | | |||||| |||| ||||||||||||| ||| |||||| Sbjct 1328 ATTAATCAAAGTCCATCCTACAATTCCAGGTCGGCCATTAAAAAACAATTTGAAATCAAA 1387 Query 1079145 ----GTTCCAAATATTTCAGGATTAAATTCAATACCCATAACAATATCATAAAATAATTT 1079200 |||| || | |||||||||||||| ||||| | | | ||| || || || Sbjct 1388 CCACTTTCCCAAGCGT---GGATTAAATTCAATTCCCATCATGAAGTTATAGAAGAAATT 1444 Query 1079201 TCCTGTAAATTT 1079212 || || ||||| Sbjct 1445 GCCAGTGAATTT 1456 >seq33583 Length=7974 Score = 89.7 bits (98), Expect = 4e-12 Identities = 135/192 (70%), Gaps = 9/192 (5%) Strand=Plus/Plus Query 1079027 AAGAATCATTGAATTAGAAACGTATCCAAAATTTTCGTATTGTTTCATTGCACACGACAA 1079086 ||| | ||| ||||||| || | |||| | ||| | |||||| ||| | || || Sbjct 57 AAGTAGCATAGAATTAGTGACTTGTCCATACAATTCCTGTTGTTTTGCAGCATAGGATAA 116 Query 1079087 ATTAATCAAATTCCAAGCAATAATTCCGGGTCTACCATTAAAAAACAGTTTCAAATCA-- 1079144 |||||||||| |||| | | |||||| |||| ||||||||||||| ||| |||||| Sbjct 117 ATTAATCAAAGTCCATCCTACAATTCCAGGTCGGCCATTAAAAAACAATTTGAAATCAAA 176 Query 1079145 ----GTTCCAAATATTTCAGGATTAAATTCAATACCCATAACAATATCATAAAATAATTT 1079200 |||| || | |||||||||||||| ||||| | | | ||| || || || Sbjct 177 CCACTTTCCCAAGCGT---GGATTAAATTCAATTCCCATCATGAAGTTATAGAAGAAATT 233 Query 1079201 TCCTGTAAATTT 1079212 || || ||||| Sbjct 234 GCCAGTGAATTT 245 >seq23496 Length=19324 Score = 89.7 bits (98), Expect = 4e-12 Identities = 135/192 (70%), Gaps = 9/192 (5%) Strand=Plus/Plus Query 1079027 AAGAATCATTGAATTAGAAACGTATCCAAAATTTTCGTATTGTTTCATTGCACACGACAA 1079086 ||| | ||| ||||||| || | |||| | ||| | |||||| ||| | || || Sbjct 16132 AAGTAGCATAGAATTAGTGACTTGTCCATACAATTCCTGTTGTTTTGCAGCATAGGATAA 16191 Query 1079087 ATTAATCAAATTCCAAGCAATAATTCCGGGTCTACCATTAAAAAACAGTTTCAAATCA-- 1079144 |||||||||| |||| | | |||||| |||| ||||||||||||| ||| |||||| Sbjct 16192 ATTAATCAAAGTCCATCCTACAATTCCAGGTCGGCCATTAAAAAACAATTTGAAATCAAA 16251 Query 1079145 ----GTTCCAAATATTTCAGGATTAAATTCAATACCCATAACAATATCATAAAATAATTT 1079200 |||| || | |||||||||||||| ||||| | | | ||| || || || Sbjct 16252 CCACTTTCCCAAGCGT---GGATTAAATTCAATTCCCATCATGAAGTTATAGAAGAAATT 16308 Query 1079201 TCCTGTAAATTT 1079212 || || ||||| Sbjct 16309 GCCAGTGAATTT 16320 Score = 86.0 bits (94), Expect = 5e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1078899 GGAAGCCAAACAGTATCACCCCAAGCCAACATCCATCCAAAATGATCATGAGCAATATCT 1078958 |||||||||||| ||| ||||| |||| ||||||||| ||||| ||||||||||| Sbjct 10906 GGAAGCCAAACACAATCTCCCCAGGCCAGATACCATCCAAAGTGATCGTGAGCAATATCC 10965 Query 1078959 ACAGTGTGAACATACCAATTTTCATTATaaaaaaaaTCAACAATATA 1079005 | || | | ||||||| ||||||| ||||||| || | || ||| Sbjct 10966 ATTGTTTTTAAATACCAAGTTTCATTCCAAAAAAAGTCCAGAACATA 11012 Score = 86.0 bits (94), Expect = 5e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1078899 GGAAGCCAAACAGTATCACCCCAAGCCAACATCCATCCAAAATGATCATGAGCAATATCT 1078958 |||||||||||| ||| ||||| |||| ||||||||| ||||| ||||||||||| Sbjct 11500 GGAAGCCAAACACAATCTCCCCAGGCCAGATACCATCCAAAGTGATCGTGAGCAATATCC 11559 Query 1078959 ACAGTGTGAACATACCAATTTTCATTATaaaaaaaaTCAACAATATA 1079005 | || | | ||||||| ||||||| ||||||| || | || ||| Sbjct 11560 ATTGTTTTTAAATACCAAGTTTCATTCCAAAAAAAGTCCAGAACATA 11606 >seq12740 Length=33937 Score = 87.8 bits (96), Expect = 1e-11 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 282321 CTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAA 282380 ||||||||| ||||| | ||||| || | || ||||| ||||| |||||||||| Sbjct 12826 CTTTGTCTTCAACCTTATCTAATCCATAAGCTAGGGCTGCAGCTGTTGGCTCATTAATAA 12885 Query 282381 TTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 282426 |||||||||||| | |||||||| ||| |||||||||||||| Sbjct 12886 CTCTCAAAACATTCAACCCAGCAATCTGTCCAGCATCTTTAGTGGC 12931 >seq99519 Length=1868 Score = 86.0 bits (94), Expect = 5e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1078899 GGAAGCCAAACAGTATCACCCCAAGCCAACATCCATCCAAAATGATCATGAGCAATATCT 1078958 |||||||||||| ||| ||||| |||| ||||||||| ||||| ||||||||||| Sbjct 1717 GGAAGCCAAACACAATCTCCCCAGGCCAGATACCATCCAAAGTGATCGTGAGCAATATCC 1776 Query 1078959 ACAGTGTGAACATACCAATTTTCATTATaaaaaaaaTCAACAATATA 1079005 | || | | ||||||| ||||||| ||||||| || | || ||| Sbjct 1777 ATTGTTTTTAAATACCAAGTTTCATTCCAAAAAAAGTCCAGAACATA 1823 >seq55457 Length=4360 Score = 86.0 bits (94), Expect = 5e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 1078899 GGAAGCCAAACAGTATCACCCCAAGCCAACATCCATCCAAAATGATCATGAGCAATATCT 1078958 |||||||||||| ||| ||||| |||| ||||||||| ||||| ||||||||||| Sbjct 3919 GGAAGCCAAACACAATCTCCCCAGGCCAGATACCATCCAAAGTGATCGTGAGCAATATCC 3860 Query 1078959 ACAGTGTGAACATACCAATTTTCATTATaaaaaaaaTCAACAATATA 1079005 | || | | ||||||| ||||||| ||||||| || | || ||| Sbjct 3859 ATTGTTTTTAAATACCAAGTTTCATTCCAAAAAAAGTCCAGAACATA 3813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3731495247523368