Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21] 186,068 sequences; 1,520,334,138 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1118 100 3e-16 >seq1118 Length=41628 Score = 100 bits (110), Expect = 3e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| | ||| || || ||||| | ||| | || || || || || || ||||||||||| Sbjct 14487 CTTTAAGCCTGTAACATGGGCAATCATTGAAGTAAGAAGTGAATAACTAGCTATGTTGAA 14428 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || ||||| |||||||| || || | ||| || ||||| || ||||| || |||| Sbjct 14427 CGGTACGCCCAGTCCCATGTCTCCAGAACGCTGATATAGCTGACAAGAGAGTTCGCCGTT 14368 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGC 147149 | |||||||||||| || ||||| || ||||| ||||| || Sbjct 14367 TAAAATGTAAAACTGGCAGAGAGCATGGCATGGAGGCAGAGCCATTGC 14320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582130894435200