Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21] 186,068 sequences; 1,520,334,138 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq589 416 9e-111 seq29087 141 3e-28 seq59098 134 4e-26 seq47242 98.7 3e-15 seq21484 98.7 3e-15 seq15004 91.5 4e-13 seq104 84.2 7e-11 >seq589 Length=133378 Score = 416 bits (460), Expect = 9e-111 Identities = 982/1464 (67%), Gaps = 27/1464 (2%) Strand=Plus/Plus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || || || ||||| ||| | || || || || ||||| ||||| Sbjct 68527 GTGGAGATTATCGCCAACGACCAAGGCAACCGCACTACACCGAGCTATGTTGCCTTTACG 68586 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||||| || | || || ||| | || || ||||||| ||| ||||| || || Sbjct 68587 GACACTGAACGCCTCATCGGAGATGCAGCCAAGAATCAAGTGGCTATGAATCCCAACAAC 68646 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA---CAA 349435 || | |||||||| ||||| || ||||| | | ||| |||| ||||| || Sbjct 68647 ACCATCTTTGATGCCAAGCGTCTCATTGGCCGCAAATTTGATGAC---TCTACGGTGCAG 68703 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 || ||| | || || | ||||| ||| || | || | || || || | | Sbjct 68704 TCCGATATGAAGCACTGGCCTTTCCGTGTGGTG---AGTGAAGCTGGGAAGCCCAAGGTA 68760 Query 349496 GAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 | || || ||||| |||| | || || | ||| || ||||||||||| || ||||| Sbjct 68761 CAAGTCGAGTATAAGTGTGAGATCAAGACCTTCTTT-CCTGAAGAAATTTCCTCTATGGT 68819 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGA-TGCTG 349613 || |||||||||||||| ||||| || || | ||| | ||| | || ||||| Sbjct 68820 ATTGACCAAAATGAAGGAAATAGCTGAGGCTTACCTGGGTTGCAAAGTC-CAGAGTGCTG 68878 Query 349614 TTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCA 349673 | ||||||||||| || || || ||||| |||| || || || |||||||| || | Sbjct 68879 TAATTACTGTACCTGCATACTTCAATGACTCCCAACGCCAAGCCACCAAAGATGCCGGTA 68938 Query 349674 GCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCAT 349733 |||| | || | ||||| | | || |||||||| ||||| ||||| || ||||| | Sbjct 68939 CCATTACAGGTCTCAATGTATTGCGCATCATTAATGAGCCCACGGCTGCTGCCATTGCCT 68998 Query 349734 ATGGGCTTGATAAAA---TGAG-TGACCA--AGaaaaaaaTATTCTTATTTTTGATTTAG 349787 |||| | ||||||| ||| || || || || ||| | || || ||||| || | Sbjct 68999 ATGGTTTGGATAAAAAAGGGAGCAGAGCAGGTGAGAAGAATGTGCTGATCTTTGACTTGG 69058 Query 349788 GTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAG 349847 ||||||| || |||||||| || | | || ||||||| || || |||||||| ||| Sbjct 69059 GTGGTGGCACATTTGATGTTTCCATTTTGACTATTGAAGATGGCATCTTTGAAGTGAAAT 69118 Query 349848 CAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATT 349907 | |||||||| ||||| ||| | ||||| || || ||||| ||||| | || |||| Sbjct 69119 CTACTGCTGGAGATACCCATTTGGGTGGGGAGGACTTTGACAATCGCATGGTGAGCCATT 69178 Query 349908 TTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATG 349966 |||| | ||||| ||||| ||||| ||| ||| |||| | || ||||| | Sbjct 69179 TTGTGGAGGAATTCAAGCG-CAAGCATAAGCGTGACATTGCTGGCAACAAGCGAGCAGTT 69237 Query 349967 CGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACC 350026 || || || | || || |||||| | || || ||| || | || | ||||| | Sbjct 69238 CGACGGCTCCGCACAGCCTGTGAAAGAGCCAAACGTACCCTGAGTTCCTCCACCCAGGCT 69297 Query 350027 TCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCT 350086 |||||||| ||||| || | |||||||| ||||||| |||| ||||| |||||| Sbjct 69298 TCTATTGAGATTGACTCATTATTTGATGGCATTGATTTCTACACATCAATTACTCGTGCT 69357 Query 350087 CGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTA 350146 || ||||| || | | ||||| || | | || | || |||||||| || | Sbjct 69358 CGCTTTGAGGAGCTCAATGCTGATCTCTTCCGTGGTACTCTTGAACCTGTGGAGAAGGCT 69417 Query 350147 TTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCT 350206 | ||||| || | |||| || ||| ||||| | ||| | |||||||| || Sbjct 69418 CTTCGTGATGCTAAGCTAGACAAAGGACAAATTAATGAAATTGTTCTGGTTGGTGGCTCA 69477 Query 350207 ACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCT 350266 || ||||| || || | ||| |||| || || || |||||||| ||||| | Sbjct 69478 ACTCGTATCCCCAAGATCCAAAAGTTGCTCCAAGACTTCTTTAATGGAAAAGAGCTAAAC 69537 Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTA 350326 | | || ||||| ||||||||||| ||||||||||||||||| ||||| ||||| || Sbjct 69538 AAAAGCATAAATCCTGATGAAGCTGTGGCATATGGTGCTGCTGTGCAGGCTGCTATTCTA 69597 Query 350327 TCTGGAAATAAGAGTTCTAAAAT-TG-ATGATCTATTACTACTAGATGTAACTCCACTTT 350384 || | | | | | ||||| || | || || | || || |||||| | ||||||| Sbjct 69598 ATGGGTGACA--AATCCGAAAATGTGCAAGACCTTCTGCTGCTTGATGTAGCACCACTTT 69655 Query 350385 CGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTA-GAAATAGTACT 350443 | || || | || ||| |||||| || ||||||| |||| || | | || | ||| Sbjct 69656 CTCTGGGTATTGAGACTGCTGGTGGTGTGATGACTG-CCTTAATCAAACGTAACACAACT 69714 Query 350444 GTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACA 350503 | || || || | |||| || || | || | | |||| || ||| || Sbjct 69715 ATTCCCACCAAGCAAACCCAGACCTTCACCACCTATTCAGACAACCAGAGTAGTGTGCTG 69774 Query 350504 ATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTT 350563 | ||||| | ||| ||||| | || ||||| || ||||| || || | ||| Sbjct 69775 GTACAAGTGTATGAGGGTGAGAGAGCCATGACTAAGGACAATAACCTGCTGGGCAAGTTT 69834 Query 350564 ACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGAT 350623 ||| | | |||||||| ||| | || || || || ||||| || | || || Sbjct 69835 GACCTGACGGGTATTCCACCTGCACCTCGTGGTGTGCCCCAAATTGAGGTGACATTTGAC 69894 Query 350624 ATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTAGT 350683 |||||| |||||||||| | |||||||| ||||| || || | || ||| | | Sbjct 69895 ATTGATGCAAATGGTATCCTCAATGTTACTGCAGTGGACAAGAGCACAGGAAAAGAGAAT 69954 Query 350684 AAGGTAGAAATTACTAATGATAAA 350707 ||| | ||| |||||||| ||| Sbjct 69955 AAGATTACAATAACTAATGACAAA 69978 Score = 212 bits (234), Expect = 2e-49 Identities = 587/892 (66%), Gaps = 10/892 (1%) Strand=Plus/Minus Query 182904 TTTTCAAGTGCGCTAACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATC 182963 || || | ||| ||||||| | |||||||| | |||| ||||||| || ||||| Sbjct 69935 TTGTCCACTGCAGTAACATTGAGGATACCATTTGCATCAATGTCAAATGTCACCTCAATT 69876 Query 182964 TGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTA 183023 || || ||||| || || |||||||| || || | ||| | || | ||| Sbjct 69875 TGGGGCACACCACGAGGTGCAGGTGGAATACCCGTCAGGTCAAACTTGCCCAGCAGGTTA 69816 Query 183024 TTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTTGAAT-AGTA-ACTGCTGGCTGAT 183081 || || ||||| | |||||||| || ||||| ||||| | || | ||| || ||| | Sbjct 69815 TTGTCCTTAGTCATGGCTCTCTCACCCTCATACACTTGTACCAGCACACTACT--CTGGT 69758 Query 183082 TATCACTATAAGTAGAAAAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGAA 183141 | || ||| || | || || ||| || | |||||||||| || || | Sbjct 69757 TGTCTGAATAGGTGGTGAAGGTCTGGGTTTGCTTGGTGGGAATAGTTGTGTTACGTTTGA 69698 Query 183142 CAATTACAGTCATTACTTCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTA 183201 | ||||||| || | | ||||| || | || | || | |||||||||||| | Sbjct 69697 TTAAGGCAGTCATCACACCACCAGCAGTCTCAATACCCAGAGAAAGTGGTGCTACATCAA 69638 Query 183202 GTAATAATAAATCTGATGTTTTATCTGATTTAATATCACTTAAAATTGCAGCTTGAACAG 183261 | | | | ||| || || ||||| | | ||| ||| ||||| || |||| Sbjct 69637 GCAGCAGAAGGTCTTGCACATTTTCGGATTTGTCACCCATTAGAATAGCAGCCTGCACAG 69578 Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATTCTTTGCCATTAA 183321 | ||||||||||| ||||||||||| || || || || ||||| ||||||| Sbjct 69577 CAGCACCATATGCCACAGCTTCATCAGGATTTATGCTTTTGTTTAGCTCTTTTCCATTAA 69518 Query 183322 AAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTA 183381 | || ||| |||| | ||| || || || || | |||||| ||||| || | || | Sbjct 69517 AGAAGTCTTGGAGCAACTTTTGGATCTTGGGGATACGAGTTGAGCCACCAACCAGAACAA 69458 Query 183382 CTTCATCGATAT-TACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCC 183440 ||||| || | | |||| ||| || | ||| | | | || || ||||| || Sbjct 69457 TTTCATTAATTTGTCCTTTGTCTAGCTTA-GCATCACGAAGAGCCTTCTCCACAGGTTCA 69399 Query 183441 ATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaa 183500 | ||| | || | ||| | | ||| || || | || | ||| | |||| Sbjct 69398 AGAGTACCACGGAAGAGATCAGCATTGAGCTCCTCAAAGCGAGCACGAGTAATTGATGTG 69339 Query 183501 aaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGAT 183560 | || ||||| |||| | |||| || ||||| ||||| || | || || || || Sbjct 69338 TAGAAATCAATGCCATCAAATAATGAGTCAATCTCAATAGAAGCCTGGGTGGAGGAACTC 69279 Query 183561 AATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATC--TTGGATTAT 183618 | || | ||| |||| |||||| ||||| | || || || | || || ||| || Sbjct 69278 AGGGTACGTTTGGCTCTTTCACAGGCTGTGCGGAGCCGTCGAACTGCTCGCTTG--TTGC 69221 Query 183619 CTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTG 183678 | | ||| || | ||||| || | || ||||| | |||||| | | | Sbjct 69220 CAGCAATGTCACGCTTATGCTTGCGCTTGAATTCCTCCACAAAATGGCTCACCATGCGAT 69161 Query 183679 TATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTC 183738 | ||||| || || ||||| ||||| ||||| |||||||||| ||| |||||||| || | Sbjct 69160 TGTCAAAGTCCTCCCCACCCAAATGGGTATCTCCAGCAGTAGATTTCACTTCAAAGATGC 69101 Query 183739 CGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 | ||||||||| | ||||| || ||||||||||| ||||||||||| ||||| Sbjct 69100 CATCTTCAATAGTCAAAATGGAAACATCAAATGTGCCACCACCCAAGTCAAA 69049 >seq29087 Length=41947 Score = 141 bits (156), Expect = 3e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || ||||| || || || || || || || | || || |||||| Sbjct 34832 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 34773 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || || |||||||| || | ||||||||||||||||| ||||| |||||| Sbjct 34772 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTATCC 34713 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || ||||| || ||||| ||||| | ||| || || || || || || | ||| Sbjct 34712 TGGATCTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 34653 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || | || || ||||| ||||||||| Sbjct 34652 TTCCCAGTCAAGGTCTTCACAAAGATCTGCATT 34620 Score = 140 bits (154), Expect = 1e-27 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || |||||||| || || || || || || || | || || |||||| Sbjct 35288 AGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCT 35229 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || ||||| || || ||||| || | ||||||||||||||||| ||||| |||||| Sbjct 35228 TCCAGCTGTTTGCCCGCGAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTATCC 35169 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || || || || || || | ||| Sbjct 35168 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 35109 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || || ||||| |||||||| Sbjct 35108 TTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 35077 Score = 129 bits (142), Expect = 2e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || ||||| || || || || || || || | || || |||||| Sbjct 35060 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 35001 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || ||||| || || ||||| || | ||||||||||||||||| ||||| |||||| Sbjct 35000 TCCAGCTGTTTGCCCGCGAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTATCC 34941 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || ||||| | ||| || || || || || || | ||| Sbjct 34940 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 34881 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || || || || |||||||| Sbjct 34880 TTYCCAGTCAAGGTCTTCACRAAGATCTGCAT 34849 >seq59098 Length=8879 Score = 134 bits (148), Expect = 4e-26 Identities = 363/546 (66%), Gaps = 12/546 (2%) Strand=Plus/Minus Query 349765 aaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGA 349824 |||| | ||||||||||| | |||||||| || |||||||| || | || || |||| Sbjct 1155 AAATGTCCTTATTTTTGACCTGGGTGGTGGCACCTTTGATGTGTCCATTCTGACGATTGA 1096 Query 349825 AGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTT 349884 || || || |||||||| ||| | || ||||| || || || || ||||| || ||||| Sbjct 1095 GGATGGCATCTTTGAAGTGAAATCGACAGCTGGAGACACTCACCTGGGTGGCGAGGATTT 1036 Query 349885 TGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATA 349943 ||| ||||| | || || ||||| ||||| ||||| ||||| ||| | || | Sbjct 1035 TGACAATCGCATGGTGAACCACTTTGTGTCGGAATTCAAGCG-CAAGCATAAGAAGGACA 977 Query 349944 TTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTT 350003 | || ||| | || | || || || | || || || || || || ||||| Sbjct 976 TCACGGACAATAAGCGGGCCGTCCGGCGGCTGCGCACAGCTTGCGAGCGGGCCAAGCGCA 917 Query 350004 CCTTATCATCTACT--ACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGA 350061 || ||| || || ||||| | || ||||||||||| || || ||| |||| || Sbjct 916 CC--CTCAGCTCCTCCACCCAGGCTTCCATTGAAATTGACTCCCTCTATGAGGGCATTGA 859 Query 350062 TTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGA 350119 |||| | || || || || ||||| |||||||| || ||| || || || | Sbjct 858 CTTCTACACCTCCATCACCCGGGCTCGCTTTGAAGA--GCTGAATGCTGACCTCTTCCGG 801 Query 350120 GCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATT 350179 | || |||| || ||||| || | || ||||| || || ||| ||| | Sbjct 800 GGTACCCTGGAGCCGGTGGAGAAGGCTTTGCGGGATGCCAAGTTGGACAAGGCCCAGGTC 741 Query 350180 GATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCT 350239 | || |||| | || || || || || || ||||| || | || || | || Sbjct 740 CACGACATAGTGCTGGTGGGGGGCTCAACCCGCATTCCCAAGATCCAGAAGCTTCTGCAG 681 Query 350240 GAGTTTTTTAATGGCAAAGAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATA 350298 || || || || |||| ||| | | | ||| | || |||||||||||||| || || || Sbjct 680 GACTTCTTCAACGGCAGAGAGCTCAACAAGAGC-ATCAATCCAGATGAAGCAGTGGCTTA 622 Query 350299 TGGTGC 350304 ||| || Sbjct 621 TGGAGC 616 Score = 105 bits (116), Expect = 2e-17 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||| || || || || ||||| |||||||| || | ||||| || || ||||||| Sbjct 1999 ATGCAGTAATCACAGTCCCAGCTTATTTTAACGACTCTCAGCGGCAAGCTACCAAAGATG 1940 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 |||||| |||||| || | |||||||| | || || || |||||||| || ||||| | Sbjct 1939 CTGGCACCATTGCTGGCCTGAATGTTCTTCGCATCATCAACGAACCCACCGCAGCAGCCA 1880 Query 349728 TTGCATATGGGCTTGATAAAA 349748 |||| ||||| || ||||||| Sbjct 1879 TTGCGTATGGTCTGGATAAAA 1859 Score = 91.5 bits (100), Expect = 4e-13 Identities = 193/288 (67%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 183504 aaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATAAT 183563 |||||||| || | ||| | ||| ||||||||||| || | || || || || | Sbjct 856 AAGTCAATGCCCTCATAGAGGGAGTCAATTTCAATGGAAGCCTGGGTGGAGGAGCTGAGG 915 Query 183564 GTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTA 183623 || | || || || || || ||||| | || || || | | | ||| || || Sbjct 916 GTGCGCTTGGCCCGCTCGCAAGCTGTGCGCAGCCGCCGGACGGCCCGCTTATTGTCCGTG 975 Query 183624 ATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCA 183683 || || | ||||| || | || ||||| | | ||| || | | | | | ||| Sbjct 976 ATGTCCTTCTTATGCTTGCGCTTGAATTCCGACACAAAGTGGTTCACCATGCGATTGTCA 1035 Query 183684 AAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCT 183743 ||||| || ||||| | || || || ||||| || | ||| |||||||| || || || Sbjct 1036 AAATCCTCGCCACCCAGGTGAGTGTCTCCAGCTGTCGATTTCACTTCAAAGATGCCATCC 1095 Query 183744 TCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 ||||| | | ||| || |||||||| || |||||||||| |||||| Sbjct 1096 TCAATCGTCAGAATGGACACATCAAAGGTGCCACCACCCAGGTCAAAA 1143 >seq47242 Length=5371 Score = 98.7 bits (108), Expect = 3e-15 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 |||| || ||||| ||||| || | ||| || |||||||| || |||||||| ||||||| Sbjct 2048 CTTTCTGGATATTGTAATCGGAGAGTGTGCGTCCATCTTCCAGCTGTTTTCCCGCAAAGA 2107 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636 | ||||| ||||||||||||||||| ||| Sbjct 2108 TCAGACGCTGCTGATCAGGAGGAATACCT 2136 Score = 86.0 bits (94), Expect = 2e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693 ||||| || ||||||||||| || || ||||| ||||| | ||| ||| || || ||| Sbjct 3408 CCTTCCTTGTCCTGAATTTTTGCCTTGACATTTTCAATTGTGTCACTTGGCTCCACCTCA 3467 Query 140694 AGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || | || || ||||| || ||||| ||||||||||||||| Sbjct 3468 AGGGTGATGGTTTTGCCGGTGAGGGTTTTCACAAAAATCTGCATT 3512 >seq21484 Length=40370 Score = 98.7 bits (108), Expect = 3e-15 Identities = 125/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 349217 GGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAAT 349276 || || || ||||| || |||| ||| | ||| ||| || ||||| ||||| ||| Sbjct 40156 GGCACCACCTATTCCTGCGTTGGTGTCTTCCAACATGGCAAGGTGGAAATCATTGCCAAT 40097 Query 349277 GATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATT 349336 || || |||||||| || |||||| ||||| ||||| || || || ||| | ||||| Sbjct 40096 GACCAGGGTAACAGGACTACGCCAAGCTACGTGGCATTCACAGATACCGAGAGACTGATT 40037 Query 349337 GGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTG 349388 |||||| ||||||| || |||| || ||||| | ||| || || |||| Sbjct 40036 GGTGATGCTGCAAAGAACCAAGTGGCGATGAATCCCACAAACACAGTCTTTG 39985 Score = 96.9 bits (106), Expect = 1e-14 Identities = 119/161 (74%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||| || | || || ||||| ||||| ||||| |||||||| || |||||||||| Sbjct 39015 ATGCCGTGGTCACAGTCCCAGCTTATTTCAATGACTCCCAGCGTCAGGCTACAAAAGATG 38956 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 | || | |||||| || | ||||| || |||| |||||||| || || || || |||| Sbjct 38955 CCGGAACCATTGCTGGTCTCAATGTGCTCCGAATTATTAATGAGCCAACCGCAGCTGCAA 38896 Query 349728 TTGCATATGGGCTTGATAAAA---TGAGTG-ACCAAGaaaa 349764 |||| || || | || |||| |||||| ||| ||||| Sbjct 38895 TTGCTTACGGCTTGGACAAAAAAGTGAGTGAACCCTGAAAA 38855 >seq15004 Length=37970 Score = 91.5 bits (100), Expect = 4e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 350107 GGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTC 350166 ||||||||| | | || ||| | ||||| | ||||| || | |||||| | || Sbjct 14779 GGATCTTTTCCGCTCCACCATGAAGCCTGTCCAGAAAGTTCTAGAGGATGCAGACCTGAA 14720 Query 350167 CAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCA 350226 ||| | ||||| ||| | || | ||||| ||||| || || ||||| ||| | || Sbjct 14719 GAAACCCGACATTGACGAAATTGTGCTTGTTGGGGGTTCCACCCGGATTCCTAAAATCCA 14660 Query 350227 ACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGA 350286 ||| | | ||||| || || |||||||| |||||||| || || || || || Sbjct 14659 GCAGCTTGTCAAGGAGTTCTTCAACGGCAAAGAGCCTTCTAGGGGCATCAACCCCGACGA 14600 Query 350287 AGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 ||| || || |||||||||||||| || || Sbjct 14599 AGCCGTGGCTTATGGTGCTGCTGTCCAAGC 14570 >seq104 Length=248294 Score = 84.2 bits (92), Expect = 7e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 130661 CATACCATAGAACACTTTATAATTTTCACCATTTTCTTCAACAACTTCCCCAGCACATTC 130720 ||| |||||||| | || |||| |||||||| ||| |||| || ||||||| || Sbjct 140477 CATTCCATAGAAAAGCTTCACTTTTTTACCATTTTTTTCTACAATATCTCCAGCACTTTG 140536 Query 130721 ATCATGTGCAGCTAACATTCCTCCAAGCATAACAAAATCAGCTCCTGCTCC 130771 |||||| | || ||||| || || ||||| ||||||||||| || ||||| Sbjct 140537 GTCATGTCCTGCAAACATGCCCCCCAGCATCACAAAATCAGCACCAGCTCC 140587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1511642039192604