Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21] 186,068 sequences; 1,520,334,138 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq9360 136 5e-27 >seq9360 Length=62991 Score = 136 bits (150), Expect = 5e-27 Identities = 132/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 32661 ATAGCCAGAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATT 32720 ||||| |||| || |||| |||| || || ||||| || || ||||| || || || Sbjct 41502 ATAGCAGGAGCTTTATGGTGGTATTACATATCCAAAGGGATTGAGTATCTGGACACAATA 41443 Query 32721 TTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTT 32780 |||||||| | |||||||||||||| ||| | |||||| | || || || |||||||| Sbjct 41442 TTCTTCATCCTAAGAAAGAAATTTAATCAAATCAGCTTTCTTCATGTCTATCACCATTTC 41383 Query 32781 ACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 || |||||||||||| | ||| | || || || ||| ||||||||||||| Sbjct 41382 ACTATGTTTACTTTATGGTGGGTTGGCATAAAGTGGGTTGCAGGAGGACA 41333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 601777891936320