Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq226026 116 3e-21 >seq226026 Length=7595 Score = 116 bits (128), Expect = 3e-21 Identities = 126/166 (76%), Gaps = 1/166 (1%) Strand=Plus/Plus Query 18971 AATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATC 19030 ||||| || |||||||| || | | || ||||||||| || ||||||| ||| | || Sbjct 3555 AATGGCTCTGCCTCCATGCCATGCTCTCTGCCAGTTTTACATTTCAAACGGCGAACTCTC 3614 Query 19031 CTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGG 19090 || || |||| ||| | || || || ||||| || || |||||||||||||| ||| | Sbjct 3615 TTGTCAGCTATATCAGCGTTCTGGAGACATGGGACTGGGCGTACCGTTCAACATAGCTAG 3674 Query 19091 ATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAA 19136 ||| |||||||||| | || | || ||||||||||| |||||| Sbjct 3675 TTATTCACTTCTTACTTCAATGATTGCACATGTTACAGG-CTTAAA 3719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397199134082100