Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq226026 89.7 6e-13 >seq226026 Length=7595 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 145777 GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGC 145836 || || || || || || ||||||||||| || || ||||| |||||||| || || ||| Sbjct 3689 GTAAGAAGTGAATAACTAGCTATGTTGAACGGTACGCCCAGTCCCATGTCTCCAGAACGC 3630 Query 145837 TGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAG 145896 || || ||||| || ||||| || ||| | | ||| |||||||| || ||||| Sbjct 3629 TGATATAGCTGACAAGAGAGTTCGCCGTTTGAAATGTAAAACTGGCAGAGAGCATGGCAT 3570 Query 145897 GGCGGCAGGGCCATGGC 145913 || ||||| ||||| || Sbjct 3569 GGAGGCAGAGCCATTGC 3553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 586585168055200