Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value SEQ39390 89.7 6e-13 >SEQ39390 Length=24836 Score = 89.7 bits (98), Expect = 6e-13 Identities = 173/253 (68%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 |||||| || || ||||| || | ||| |||||||||| || ||||| |||| || Sbjct 21452 GAACTTTTCAAAATTCCATGCGATGTCACTGCGGCACACAGGGGACCAAATTATGAACTT 21511 Query 83203 GGGGTCGCTCACGAGCGTGCTCATG-TCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGA 83261 || ||| ||| || | | || | || || || | |||| || ||| |||| Sbjct 21512 TGGATCGGTCATCAGGGA-CACAGGATCATCATGTGGGGTAGGCAAGGATTCTTTCAGGA 21570 Query 83262 AGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGT 83321 ||| || ||||| || || | || || || || |||||||| || | |||| Sbjct 21571 GCTTGAAAAGAGGATGAGCATTTTCCCCATTAACTTCACACTTCTCAAACACGGGGAAGT 21630 Query 83322 TCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCT 83381 | ||||| | || || ||||||||||| | ||||||||| || ||||||| |||| Sbjct 21631 TGGGCTCATATCCATTGCCAGGACGGACATATTTCAGGGAATTCAGGATCTCGTCATTGG 21690 Query 83382 GGGCGTTTTCCTG 83394 ||| |||||||| Sbjct 21691 TGGCATTTTCCTG 21703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605194397135200