Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq226026 118 8e-22 >seq226026 Length=7595 Score = 118 bits (130), Expect = 8e-22 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 20400 AATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTC 20459 ||||||| |||||||||| ||| || ||||| |||||| || | || ||| | || Sbjct 3555 AATGGCTCTGCCTCCATGCCATGCTCTCTGCCAGTTTTACATTTCAAACGGCGAACTCTC 3614 Query 20460 GTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAG 20519 ||||| | ||||| || || | || ||||||||||| || || ||||| || || || Sbjct 3615 TTGTCAGCTATATCAGCGTTCTGGAGACATGGGACTGGGCGTACCGTTCAACATAGCTAG 3674 Query 20520 TTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564 |||| | || ||||| | ||||||||||||||||||| ||||| Sbjct 3675 TTATTCACTTCTTACTTCAATGATTGCACATGTTACAGGCTTAAA 3719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396880980264100