Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq252873 89.7 4e-13 >seq252873 Length=5941 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064 ||| || || || || || || |||||||| ||| | ||| |||||||| || Sbjct 1230 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCCAGCTG 1171 Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124 |||||| ||| | || |||||||| |||||| || | |||||| ||||| || || Sbjct 1170 TTTGCCGGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATCTT 1111 Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184 || || | ||| | |||| || ||| |||| ||| ||||| |||||||| Sbjct 1110 GGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGT 1051 Query 20185 CAACGTTTTGACAAAAATTTGCATTTT 20211 ||| || || ||||| || |||||||| Sbjct 1050 CAAGGTCTTCACAAAGATCTGCATTTT 1024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417166467699780