Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value SEQ44424 82.4 4e-11 >SEQ44424 Length=19146 Score = 82.4 bits (90), Expect = 4e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 3619 TGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGTT 3678 |||| || | ||||||||||| ||||| ||||| || ||||||||| |||||| | | Sbjct 17619 TGAACTGCTGTATTTTGCTGATGTATGTGCTGGCCCTGGTGGTTTCTCAGAATATGTCCT 17560 Query 3679 ATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGCGaaaaaaaTGATTT 3738 ||||| | ||| ||| || ||||||| ||| ||||| ||| | | ||||||||| Sbjct 17559 CTGGAGGAGGAAGTGGCATGCAAAAGGTTTTGGGATGACCTTAAAAGGACCAAATGATTT 17500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 274958074130140