Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq387423 113 5e-20 >seq387423 Length=3253 Score = 113 bits (124), Expect = 5e-20 Identities = 114/147 (78%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 21487 ACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAA 21546 |||| || |||| |||| ||||| || | ||||||||||| || | || ||||| | Sbjct 2651 ACAAATCATACCT-CATCTCTACTAATCAGCTCATTAGAAAAAGTAAGTCCAGGCATCAG 2709 Query 21547 TCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAAC 21606 |||| || |||| |||||||||||| ||||| | || |||||||| || || ||||| Sbjct 2710 ACCTCGTTTCTTTAGCCAAAATATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCAAC 2769 Query 21607 GGCAGCAAATGCAACTAATCGTTCACC 21633 ||||||||||| |||| |||||||| Sbjct 2770 TGCAGCAAATGCTACTACACGTTCACC 2796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 528753409991200