Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq226026 86.0 5e-12 >seq226026 Length=7595 Score = 86.0 bits (94), Expect = 5e-12 Identities = 90/117 (77%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 20235 TAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAG 20294 |||| || |||||||| |||| ||| |||| | || ||||| || || ||||| || | Sbjct 3717 TAAG-CCTGTAACATGTGCAATCATTGAAGTAAGAAGTGAATAACTAGCTATGTTGAACG 3659 Query 20295 GAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGT 20351 | || |||| ||||||||||| || | |||||| |||||||| || || || |||| Sbjct 3658 GTACGCCCAGTCCCATGTCTCCAGAACGCTGATATAGCTGACAAGAGAGTTCGCCGT 3602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438761086799200