Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq935 82.4 6e-11 >seq935 Length=7348 Score = 82.4 bits (90), Expect = 6e-11 Identities = 72/86 (84%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||| |||||| | | || | | |||||| Sbjct 910 CATGTATTAGCTCTAGAATTACCACAGTTATCCGAGTAACGGTGGGAGCGACCAAAGGAA 851 Query 115587 CCAAAACTGATATATTGAGCCATTCG 115612 ||| ||||||| || ||||||||||| Sbjct 850 CCATAACTGATTTAATGAGCCATTCG 825 Score = 82.4 bits (90), Expect = 6e-11 Identities = 72/86 (84%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||| |||||| | | || | | |||||| Sbjct 910 CATGTATTAGCTCTAGAATTACCACAGTTATCCGAGTAACGGTGGGAGCGACCAAAGGAA 851 Query 114390 CCAAAACTGATATATTGAGCCATTCG 114415 ||| ||||||| || ||||||||||| Sbjct 850 CCATAACTGATTTAATGAGCCATTCG 825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394771620450760