Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq252873 82.4 5e-11 >seq252873 Length=5941 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || || || || |||||||| ||| ||| | | | ||||| | ||| Sbjct 1457 TGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGGCCATCTTCCAGCTGT 1398 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| || | |||| | |||||| || ||||| ||||||||||| || ||| Sbjct 1397 TTGCCGGCAAAGATCAGCCTCTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTG 1338 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || ||||| || || |||| ||| ||||| || || ||| Sbjct 1337 GCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCTAGGGTGATGGTCTTGCCGGTC 1278 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 | || || ||||| || ||||| Sbjct 1277 AAGGTCTTCACAAAGATCTGCAT 1255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355330091633300