Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq252873 82.4 6e-11 >seq252873 Length=5941 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 |||||||| || ||||| || || || || ||||| ||||| ||| | || |||| | Sbjct 1024 AAAATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 1083 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 |||| || | | | || || ||||| || || |||||| | || ||| Sbjct 1084 AGCGACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCCGAT 1143 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||||| || || | ||| || ||||||||||| || | | || | | |||||| Sbjct 1144 CAGCAGAGGCTGATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTCTCCGACTAC 1203 Query 107733 AACATTCAAAAGGAGTCTAC 107752 ||||| || |||||||| || Sbjct 1204 AACATCCAGAAGGAGTCCAC 1223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396575552598820