Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq226026 100 3e-16 >seq226026 Length=7595 Score = 100 bits (110), Expect = 3e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| | ||| || || || || | ||| | || || || || || || ||||||||||| Sbjct 3720 CTTTAAGCCTGTAACATGTGCAATCATTGAAGTAAGAAGTGAATAACTAGCTATGTTGAA 3661 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || ||||| |||||||| || || | ||| || ||||| || ||||| || |||| Sbjct 3660 CGGTACGCCCAGTCCCATGTCTCCAGAACGCTGATATAGCTGACAAGAGAGTTCGCCGTT 3601 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGC 147149 | | |||||||||||| || ||||| || ||||| ||||| || Sbjct 3600 TGAAATGTAAAACTGGCAGAGAGCATGGCATGGAGGCAGAGCCATTGC 3553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580035355632000