Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq252873 122 8e-23 >seq252873 Length=5941 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| | || || | || |||||||| || || ||||| Sbjct 1446 CTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAA 1387 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||| || || | ||||| || ||||||||| |||||| ||| | | | Sbjct 1386 GATCAGCCTCTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 1327 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | |||||||| | ||||| || || || ||||| || ||||| Sbjct 1326 CTCAATGGTGTCGCTGGGCTCCACCTCTAGGGTGATGGTCTTGCCGGTCAAGGTCTTCAC 1267 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 1266 AAAGATCTGCAT 1255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448126141570400