Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq226026 84.2 2e-11 >seq226026 Length=7595 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 111787 TGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCC 111846 ||||||||||| | || || || |||||||| ||||| || || || || || ||| Sbjct 3704 TGTGCAATCATTGAAGTAAGAAGTGAATAACTAGCTATGTTGAACGGTACGCCCAGTCCC 3645 Query 111847 ATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGA 111906 || ||||| || | |||||||||||||| || |||| | ||| | ||||| || Sbjct 3644 ATGTCTCCAGAACGCTGATATAGCTGACAAGAGAGTTCGCCGTTTGAAATGTAAAACTGG 3585 Query 111907 CAAAGTACATGACAAGGAGGCAATGCCAT 111935 || || |||| || ||||||| ||||| Sbjct 3584 CAGAGAGCATGGCATGGAGGCAGAGCCAT 3556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 389684340900940