Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq226026 102 7e-17 >seq226026 Length=7595 Score = 102 bits (112), Expect = 7e-17 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 |||||| || ||||| || || || ||||| | |||||||| || ||| | | || Sbjct 3544 GATCTCTCTGCAATGGCTCTGCCTCCATGCCATGCTCTCTGCCAGTTTTACATTTCAAAC 3603 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || || || || || ||||| ||||| || || ||||||||||| | || || |||||| Sbjct 3604 GGCGAACTCTCTTGTCAGCTATATCAGCGTTCTGGAGACATGGGACTGGGCGTACCGTTC 3663 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGT 34728 ||||| |||||||| | || || || | ||||| || ||||| Sbjct 3664 AACATAGCTAGTTATTCACTTCTTACTTCAATGATTGCACATGT 3707 Score = 102 bits (112), Expect = 7e-17 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 ||||| || ||||| | || || || | |||||||| ||||||||||| || || | Sbjct 3707 ACATGTGCAATCATTGAAGTAAGAAGTGAATAACTAGCTATGTTGAACGGTACGCCCAGT 3648 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 ||||||||||| || || ||||| ||||| || || || || || || | | ||| || Sbjct 3647 CCCATGTCTCCAGAACGCTGATATAGCTGACAAGAGAGTTCGCCGTTTGAAATGTAAAAC 3588 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 |||||||| | ||||| || || || ||||| || |||||| Sbjct 3587 TGGCAGAGAGCATGGCATGGAGGCAGAGCCATTGCAGAGAGATC 3544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445609919313600