Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value SEQ21056 104 2e-17 >SEQ21056 Length=9901 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 ||||| || ||||| ||||||||||| ||||||||||| | ||||| || |||||||| Sbjct 5996 GTTGTGGAAGAGCTGTTCCGAGATGGAGTAAACTGGGGAAGGATTGTGGCATTCTTTGAA 5937 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 |||||||| | ||||||||||||| |||| | | | || | | || || |||| Sbjct 5936 TTTGGTGGCATGCTGTGTGTGGAAAGTGTCAGTCGGGAGATGTCACCTCTGGTGGACAGT 5877 Query 3365 ATTGCCGCGTGGATGACAGA 3384 ||||| | |||||||| || Sbjct 5876 ATTGCTGAATGGATGACTGA 5857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412085551226320