Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq3662 84.2 2e-11 >seq3662 Length=9627 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 114296 CTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGAGAACCAA 114355 || || ||||| || | |||| | | | ||| | ||| || || ||||||||||||||| Sbjct 5217 CTAAGTACTACATTAATTCTGTTTTTTAAAGGACGATTTTTCTCAGGGATGGAGAACCAA 5158 Query 114356 GTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||| ||||||||||| ||||| || ||||| ||| Sbjct 5157 GTCTTCCTACCCATTATGACCACATTTTGCTTTCCT 5122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 403819915034680