Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gavialis_20gangeticus_20[refseq_20GCF_5F001723915.1_202016-09-13] 81 sequences; 2,640,792,433 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq77 82.4 9e-11 >seq77 Length=119004422 Score = 82.4 bits (90), Expect = 9e-11 Identities = 143/205 (70%), Gaps = 6/205 (3%) Strand=Plus/Minus Query 164500 TTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACA 164559 ||||| || || ||| | ||||| || | ||| ||||||| || || || ||||||||| Sbjct 107090800 TTAGGTTGCAAGCATGTGAAAGGTATCCTGTTATATGGACCACCAGGCTGTGGTAAAACA 107090741 Query 164560 TTAATGGCTCGATGCATTGCTCAAGCTTTTAAATCGC---GACCCGTTAAAATTGTTAAT 164616 | ||||| || |||| |||| | | ||| | || || ||| | || ||| Sbjct 107090740 CTCATGGCAAGACAGATTGG-CAAGATGCTGAATGCCAGAGAACCA--AAAGTGGTCAAT 107090684 Query 164617 GGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTT 164676 ||||| ||| | | |||||||||||||| |||||||| || || | | ||| | || Sbjct 107090683 GGTCCAGAAATCCTTAACAAATATGTAGGCGAGTCAGAGGCCAACATCCGCAAGCTCTTC 107090624 Query 164677 CAGGAGGCTGAAGAAGAACAAAAGA 164701 || || ||||| ||||||| || Sbjct 107090623 GCTGATGCAGAAGAGGAACAAAGGA 107090599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871396679600