Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gavialis_20gangeticus_20[refseq_20GCF_5F001723915.1_202016-09-13] 81 sequences; 2,640,792,433 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq38 107 2e-18 >seq38 Length=209695328 Score = 107 bits (118), Expect = 2e-18 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || |||||||||| ||| || || | || ||||| |||||||| || ||||| Sbjct 98350425 AGGCCTGTCACATGAGCAATCATGTACGTGAGCAGTGAATAACTGGCAATATTGAAAGGC 98350484 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 ||||| | ||||| ||||| || |||||||||||||| || |||||||| || | | Sbjct 98350485 ACTCCTAGTCCCATATCTCCAGATCTCTGATACAGCTGGCAAGAAAGCTCGCCATTTACA 98350544 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGA 20403 ||||| ||||| || | || || || || | |||||||| || Sbjct 98350545 ACATAGAATTGGCAGAGAGCATGGCAAGGGGGTAAAGCCATCAAGGA 98350591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372353110040