Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gavialis_20gangeticus_20[refseq_20GCF_5F001723915.1_202016-09-13] 81 sequences; 2,640,792,433 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq78 107 4e-18 >seq78 Length=264820526 Score = 107 bits (118), Expect = 4e-18 Identities = 124/165 (75%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 |||||||||| || || ||||||||||||||||| |||||||||||||||||| ||| Sbjct 1193999 GTGTACTCCACTATTTCCGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGG 1193940 Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGG 213647 || ||| ||| ||| |||||||| ||||| || |||| |||||||| |||| Sbjct 1193939 TTGCTCTTCCGGTTACAAGAGTCCTTGTACAGCATATAAGGGGTACCGGTCTCAGTCTGG 1193880 Query 213648 GACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTGACCACCC 213690 ||| | | | |||| |||||| | | ||| || ||||||| Sbjct 1193879 GACTCAATGA--TGGCATACCAGAGCTGCTGGGCTTTCACCACCC 1193837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531856823040