Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gavialis_20gangeticus_20[refseq_20GCF_5F001723915.1_202016-09-13] 81 sequences; 2,640,792,433 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq38 100 2e-16 >seq38 Length=209695328 Score = 100 bits (110), Expect = 2e-16 Identities = 116/154 (75%), Gaps = 8/154 (5%) Strand=Plus/Plus Query 111787 TGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCC 111846 || ||||||||||| ||||| || ||||| ||||| || || ||||| ||||| ||| Sbjct 98350437 TGAGCAATCATGTACGTGAGCAGTGAATAACTGGCAATATTGAAAGGCACTCCTAGTCCC 98350496 Query 111847 ATATCTCCCGATCTTTGATATAGCTGACATGATAGTT---TATTTTGTGAC-ACATAAAA 111902 |||||||| ||||| ||||| ||||| || || || | |||| || ||||| || Sbjct 98350497 ATATCTCCAGATCTCTGATACAGCTGGCAAGAAAGCTCGCCATTT----ACAACATAGAA 98350552 Query 111903 TTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 ||| || || |||| ||||| || || |||||| Sbjct 98350553 TTGGCAGAGAGCATGGCAAGGGGGTAAAGCCATC 98350586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391945213076203