Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gavialis_20gangeticus_20[refseq_20GCF_5F001723915.1_202016-09-13]
81 sequences; 2,640,792,433 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq38 95.1 9e-15
>seq38
Length=209695328
Score = 95.1 bits (104), Expect = 9e-15
Identities = 118/162 (73%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 27207 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 27266
||| || || || ||||| |||||||||||||| || || || ||||| || || || ||
Sbjct 98350424 TAGGCCTGTCACATGAGCAATCATGTACGTGAGCAGTGAATAACTGGCAATATTGAAAGG 98350483
Query 27267 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCT 27326
|| || || ||||| || || || ||||| || ||||| || || ||||| ||||
Sbjct 98350484 CACTCCTAGTCCCATATCTCCAGATCTCTGATACAGCTGGCAAGAAAGCTCGCCATTTAC 98350543
Query 27327 TACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368
|| || || || || | || ||||| || || | ||||||
Sbjct 98350544 AACATAGAATTGGCAGAGAGCATGGCAAGGGGGTAAAGCCAT 98350585
Score = 89.7 bits (98), Expect = 4e-13
Identities = 121/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 27488 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGT 27547
|||| || | || |||||||| ||||| ||||| ||||| || || || ||||| | |
Sbjct 98356063 TCATATCTTTATATTCTGCTCCAAAATGTCTCCACTGGAAACCATAAACAGGTCCTAAAT 98356122
Query 27548 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607
| || || | ||||| ||| || || ||||| || || | || || ||||| |
Sbjct 98356123 CACCTTCCACTCTGTGGGTGAAACCTTGTTTATCCAAGAACTCACGTGATCCATTGGCAT 98356182
Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656
|||| ||||| || ||||| | ||||||||||| | ||||| || ||
Sbjct 98356183 CCCAAATCTTGACTCCCTTTGCAGAGAGCTCTTTAGCATTTGTAGAGCC 98356231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369506835227111
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |