Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gavialis_20gangeticus_20[refseq_20GCF_5F001723915.1_202016-09-13] 81 sequences; 2,640,792,433 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq38 82.4 3e-11 >seq38 Length=209695328 Score = 82.4 bits (90), Expect = 3e-11 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCG 52169 ||||| || | || |||||| | || | |||||||||||| | | || ||||||| Sbjct 98350585 ATGGCTTTACCCCCTTGCCATGCTCTCTGCCAATTCTATGTTGTAAATGGCGAGCTTTCT 98350526 Query 52170 TGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGC 52229 ||||| |||||||| | |||| || ||| | || || || || || |||||||| Sbjct 98350525 TGCCAGCTGTATCAGAGATCTGGAGATATGGGACTAGGAGTGCCTTTCAATATTGCCAGT 98350466 Query 52230 TATTCCTTGCTGACGCATCTGATTGCTC 52257 ||||| |||| ||| | ||||||||| Sbjct 98350465 TATTCACTGCTCACGTACATGATTGCTC 98350438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190095817151410