Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq15656 96.9 2e-15 >seq15656 Length=1245196 Score = 96.9 bits (106), Expect = 2e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 ||||| ||||||||||| ||||||||||| |||||||| || || | ||| ||||||||| Sbjct 956212 TATTCCGCTCCAAAATGTCTCCATTGGAAACCATAAACTGGACCCAAGTCCCCTTCTTCT 956271 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 ||| | |||||| | || ||||| | | ||| ||||| |||||||| || Sbjct 956272 CTAGAAACGAAACCCTGTTTGTCTAAGAATTCACGAGAACCATTGGCATCCCAGATCCTG 956331 Query 97522 ACACCAGATGCTGCAAGCTCTTT 97544 ||||| || | ||||||||| Sbjct 956332 ACACCTTTAGCAGAAAGCTCTTT 956354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345974638655000