Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2823 86.0 5e-12 >seq2823 Length=399890 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/215 (68%), Gaps = 14/215 (7%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||| ||| | || |||||||| || |||||||| || | |||| | ||| Sbjct 388488 CACCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCACCCATC 388547 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || ||||| || || || |||| ||||||||||| | ||||| || Sbjct 388548 TTCCAGCTGCTTCCCTGCAAAGATCAGACGCTGCTGGT--------------TCCTTATC 388593 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 ||||||| ||| || | || | ||||| || || ||||| | ||| | || Sbjct 388594 CTGAATTTTTGCTTTTACATTCTCAATCGTGTCACTGGGTTCCACCTCAAGGGTGATTGT 388653 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 ||| || ||||| ||||| |||||||||||||||| Sbjct 388654 TTTCCCAGTCAGGGTTTTCACAAAAATCTGCATGG 388688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432817880518000