Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq15656 114 1e-20 >seq15656 Length=1245196 Score = 114 bits (126), Expect = 1e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 20400 AATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTC 20459 |||||| ||||||||||||||| || ||||| || || ||| || |||| | || Sbjct 954271 AATGGCCTTGCCTCCATGTCATGCTCTCTGCCAGTTCTATGTTTTAAACGGTGAACTCTC 954212 Query 20460 GTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAG 20519 ||||| ||||||| || || | || ||||| |||| || || |||||||||||||| Sbjct 954211 CTGTCAGTTGTATCAGCGGTCAGGAGACATGGGTTTGGGAGTACCCTTCAATATTGCAAG 954152 Query 20520 TTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 |||| |||| ||||||| |||||||| || | |||| Sbjct 954151 TTATTCGCTTCTTACGTTGATGATTGCTCACATCACAG 954114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398252341967500