Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_002730.1 Length=38297 Score E Sequences producing significant alignments: (Bits) Value seq43781 80.6 7e-11 >seq43781 Length=34687 Score = 80.6 bits (88), Expect = 7e-11 Identities = 86/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 20415 ATTAAATCGCTCGAAGGCATTGATATCTGCTGGGTGGAGGAAGCGGAAGCGGTAACGAAG 20474 ||||| || || |||||| ||||||| || ||||||||||||||| || || | || Sbjct 6012 ATTAAGTCACTTGAAGGCGTTGATATTTGTTGGGTGGAGGAAGCGCAAAGTGTTTCAAAA 5953 Query 20475 GAATCATGGGATATCCTGATACCAACCATCCGCAAGCCATTTTCCGAAATATGG 20528 ||||||||||| |||| || || || || || ||| | || ||||||||| Sbjct 5952 GAATCATGGGACCTCCTCATTCCTACAATACGTAAGGAAAACTCTGAAATATGG 5899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122150389257000