Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq43781 84.2 5e-12 >seq43781 Length=34687 Score = 84.2 bits (92), Expect = 5e-12 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 735 ATTAAATCGCTCGAAGGCATTGATATCTGCTGGGTGGAAGAAGCGGAAGCGGTAACAAAG 794 ||||| || || |||||| ||||||| || |||||||| |||||| || || |||| Sbjct 6012 ATTAAGTCACTTGAAGGCGTTGATATTTGTTGGGTGGAGGAAGCGCAAAGTGTTTCAAAA 5953 Query 795 GAATCGTGGGATATCCTGATACCAACCATCCGCAAGCCGTTCTCTGAAATATGGGTGAGC 854 ||||| ||||| |||| || || || || || ||| ||||||||||||| | Sbjct 5952 GAATCATGGGACCTCCTCATTCCTACAATACGTAAGGAAAACTCTGAAATATGGATTTCA 5893 Query 855 TTTAACCCGAAGAACATACTCGACGATACCTATCAGCGATTCGTAGTAAACCCTCCCGA 913 || ||||| || | || || |||||| | ||||| ||| | ||||| || || Sbjct 5892 TTCAACCCTTTTAATCCAGAAGATGAAACCTATAACCGATTTGTACTCAACCCCCCTGA 5834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124532160615000