Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq7398 82.4 6e-11 >seq7398 Length=384992 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 115280 TTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG 115339 || |||||||| || || || || || | | || |||||||||||| | || |||| Sbjct 232194 TTCAAAATGCAGATCTTCGTGAAGACCTTGAATGGCAAAACCATTACCCTGGAGGTGGAG 232135 Query 115340 TCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTT 115399 |||| ||||| ||| | || || || || || ||||| ||| |||| | Sbjct 232134 CCCAGTGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCT 232075 Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 || ||||| ||||| || | ||| ||||| || | ||||||| | ||| | | || Sbjct 232074 GACCAGCAGAGACTGATGTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTGAC 232015 Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || ||||| || || ||||| || | ||| | |||||| | || | ||||| Sbjct 232014 TACAACATCCAGAAGGAGTCCACCCTCCATCTTGTGTTGCGCCTGAGGGGAGG 231962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424351286980000