Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq5570 82.4 8e-11 >seq5570 Length=534135 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 |||||| || || | || || | ||| || |||||||| | |||||| ||||| ||| Sbjct 272131 TCATTGGAAAAAGTGAGTCCGGGCATCAGCCCCCGTTTCTTCAACCAAAAAATTGATGCA 272072 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 ||| ||||||||| || ||||||||||| || || || || || || ||||| Sbjct 272071 AAAGAACCAGAAAAGAAGATACCTTCCACTGCAGCGAAAGCAACTATGCGTTC 272019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555527814460000