Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq12361 89.7 4e-13 seq4607 86.0 5e-12 seq22844 84.2 2e-11 seq10288 84.2 2e-11 seq8034 84.2 2e-11 seq7398 82.4 6e-11 >seq12361 Length=312203 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| |||||||||||||| || ||| |||||||| |||||||| || | Sbjct 239793 CCTCCCCTCAGGCGCAGCACCAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 239734 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| |||| |||||||| ||||| ||||| | |||||| || || Sbjct 239733 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 239674 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 239673 ATGCCCTCTTTGTC 239660 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| |||||||||||||| || ||| |||||||| |||||||| || | Sbjct 240021 CCTCCCCTCAGGCGCAGCACCAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 239962 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| |||| |||||||| ||||| ||||| | |||||| || || Sbjct 239961 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 239902 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 239901 ATGCCCTCTTTGTC 239888 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| |||||||||||||| || ||| |||||||| |||||||| || | Sbjct 240249 CCTCCCCTCAGGCGCAGCACCAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 240190 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| |||| |||||||| ||||| ||||| | |||||| || || Sbjct 240189 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 240130 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 240129 ATGCCCTCTTTGTC 240116 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| |||||||||||||| || ||| |||||||| |||||||| || | Sbjct 240477 CCTCCCCTCAGGCGCAGCACCAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 240418 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| |||| |||||||| ||||| ||||| | |||||| || || Sbjct 240417 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 240358 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 240357 ATGCCCTCTTTGTC 240344 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| |||||||||||||| || ||| |||||||| |||||||| || | Sbjct 240705 CCTCCCCTCAGGCGCAGCACCAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 240646 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| |||| |||||||| ||||| ||||| | |||||| || || Sbjct 240645 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 240586 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 240585 ATGCCCTCTTTGTC 240572 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| |||||||||||||| || ||| |||||||| |||||||| || | Sbjct 240933 CCTCCCCTCAGGCGCAGCACCAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 240874 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| |||| |||||||| ||||| ||||| | |||||| || || Sbjct 240873 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 240814 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 240813 ATGCCCTCTTTGTC 240800 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| |||||||||||||| || ||| |||||||| |||||||| || | Sbjct 241161 CCTCCCCTCAGGCGCAGCACCAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 241102 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| |||| |||||||| ||||| ||||| | |||||| || || Sbjct 241101 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 241042 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 241041 ATGCCCTCTTTGTC 241028 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| |||||||||||||| || ||| |||||||| |||||||| || | Sbjct 241389 CCTCCCCTCAGGCGCAGCACCAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 241330 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| |||| |||||||| ||||| ||||| | |||||| || || Sbjct 241329 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 241270 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 241269 ATGCCCTCTTTGTC 241256 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| |||||||||||||| || ||| |||||||| |||||||| || | Sbjct 241617 CCTCCCCTCAGGCGCAGCACCAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 241558 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| |||| |||||||| ||||| ||||| | |||||| || || Sbjct 241557 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 241498 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 241497 ATGCCCTCTTTGTC 241484 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 33899 AACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTG 33958 |||| || || || |||||||||||||| || ||| |||||||| |||||||| || | Sbjct 241847 AACCACCCCTGAGACGCAGCACCAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAG 241788 Query 33959 CCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | || |||| |||| |||||||| ||||| ||||| | |||||| || | Sbjct 241787 AGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGG 241728 Query 34019 GCACGCTCTCTTTGTC 34034 | | || ||||||||| Sbjct 241727 GGATGCCCTCTTTGTC 241712 >seq4607 Length=116780 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 |||||||||| |||||||| ||||| || ||| ||||||||| |||||||| || | Sbjct 8595 CCTCCTCTCAAGCGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 8536 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || || | |||||||||||||| ||||| | |||||| || || Sbjct 8535 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGG 8476 Query 34021 ACGCTCTCTTTGTCC 34035 | || |||||||||| Sbjct 8475 ATGCCCTCTTTGTCC 8461 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 |||||||||| |||||||| ||||| || ||| ||||||||| |||||||| || | Sbjct 9507 CCTCCTCTCAAGCGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 9448 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || || | |||||||||||||| ||||| | |||||| || || Sbjct 9447 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGG 9388 Query 34021 ACGCTCTCTTTGTCC 34035 | || |||||||||| Sbjct 9387 ATGCCCTCTTTGTCC 9373 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 |||||||||| |||||||| ||||| || ||| ||||||||| |||||||| || | Sbjct 9735 CCTCCTCTCAAGCGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 9676 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || || | |||||||||||||| ||||| | |||||| || || Sbjct 9675 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAACATCAGTCTCTGCTGGTCAGGAGGG 9616 Query 34021 ACGCTCTCTTTGTCC 34035 | || |||||||||| Sbjct 9615 ATGCCCTCTTTGTCC 9601 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 |||||||||| |||||||| ||||| || ||| ||||||||| |||||||| || | Sbjct 9963 CCTCCTCTCAAGCGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 9904 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || || | |||||||||||||| ||||| | |||||| || || Sbjct 9903 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAACATCAGTCTCTGCTGGTCAGGAGGG 9844 Query 34021 ACGCTCTCTTTGTCC 34035 | || |||||||||| Sbjct 9843 ATGCCCTCTTTGTCC 9829 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| |||| |||||||| ||||| || ||| ||||||||| |||||||| || | Sbjct 8367 CCTCCCCTCAAGCGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 8308 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || || | |||||||||||||| ||||| | |||||| || || Sbjct 8307 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGG 8248 Query 34021 ACGCTCTCTTTGTCC 34035 | || |||||||||| Sbjct 8247 ATGCCCTCTTTGTCC 8233 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| |||| |||||||| ||||| || ||| ||||||||| |||||||| || | Sbjct 9279 CCTCCCCTCAAGCGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 9220 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || || | |||||||||||||| ||||| | |||||| || || Sbjct 9219 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAACATCAGTCTCTGCTGGTCAGGAGGG 9160 Query 34021 ACGCTCTCTTTGTCC 34035 | || |||||||||| Sbjct 9159 ATGCCCTCTTTGTCC 9145 >seq22844 Length=10872 Score = 84.2 bits (92), Expect = 2e-11 Identities = 74/89 (83%), Gaps = 4/89 (4%) Strand=Plus/Plus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAG 114386 || |||||||| |||||||||||||||| |||||||||| ||| | | || | | ||| Sbjct 1789 TGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGGAACGGTGGGAGCGACCAAAG 1848 Query 114387 GAACCAAAACTGATATATTGAGCCATTCG 114415 |||||| ||||||| || ||||||||||| Sbjct 1849 GAACCATAACTGATTTAATGAGCCATTCG 1877 Score = 84.2 bits (92), Expect = 2e-11 Identities = 74/89 (83%), Gaps = 4/89 (4%) Strand=Plus/Plus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAG 115583 || |||||||| |||||||||||||||| |||||||||| ||| | | || | | ||| Sbjct 1789 TGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGGAACGGTGGGAGCGACCAAAG 1848 Query 115584 GAACCAAAACTGATATATTGAGCCATTCG 115612 |||||| ||||||| || ||||||||||| Sbjct 1849 GAACCATAACTGATTTAATGAGCCATTCG 1877 >seq10288 Length=20680 Score = 84.2 bits (92), Expect = 2e-11 Identities = 74/89 (83%), Gaps = 4/89 (4%) Strand=Plus/Plus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAG 114386 || |||||||| |||||||||||||||| |||||||||| ||| | | || | | ||| Sbjct 10807 TGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGGAACGGTGGGAGCGACCAAAG 10866 Query 114387 GAACCAAAACTGATATATTGAGCCATTCG 114415 |||||| ||||||| || ||||||||||| Sbjct 10867 GAACCATAACTGATTTAATGAGCCATTCG 10895 Score = 84.2 bits (92), Expect = 2e-11 Identities = 74/89 (83%), Gaps = 4/89 (4%) Strand=Plus/Plus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAG 115583 || |||||||| |||||||||||||||| |||||||||| ||| | | || | | ||| Sbjct 10807 TGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGGAACGGTGGGAGCGACCAAAG 10866 Query 115584 GAACCAAAACTGATATATTGAGCCATTCG 115612 |||||| ||||||| || ||||||||||| Sbjct 10867 GAACCATAACTGATTTAATGAGCCATTCG 10895 >seq8034 Length=23043 Score = 84.2 bits (92), Expect = 2e-11 Identities = 74/89 (83%), Gaps = 4/89 (4%) Strand=Plus/Plus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAG 114386 || |||||||| |||||||||||||||| |||||||||| ||| | | || | | ||| Sbjct 7928 TGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGGAACGGTGGGAGCGACCAAAG 7987 Query 114387 GAACCAAAACTGATATATTGAGCCATTCG 114415 |||||| ||||||| || ||||||||||| Sbjct 7988 GAACCATAACTGATTTAATGAGCCATTCG 8016 Score = 84.2 bits (92), Expect = 2e-11 Identities = 74/89 (83%), Gaps = 4/89 (4%) Strand=Plus/Plus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAG--ATCTAAG 115583 || |||||||| |||||||||||||||| |||||||||| ||| | | || | | ||| Sbjct 7928 TGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGGAACGGTGGGAGCGACCAAAG 7987 Query 115584 GAACCAAAACTGATATATTGAGCCATTCG 115612 |||||| ||||||| || ||||||||||| Sbjct 7988 GAACCATAACTGATTTAATGAGCCATTCG 8016 >seq7398 Length=384992 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| |||| ||| ||||| || ||| ||||||||| |||||||| || | Sbjct 231962 CCTCCCCTCAGGCGCAACACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 232021 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || || | |||||||||||||| ||||| | |||||| || || Sbjct 232022 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAACATCAGTCTCTGCTGGTCAGGAGGG 232081 Query 34021 ACGCTCTCTTTGTCC 34035 | || |||||||||| Sbjct 232082 ATGCCCTCTTTGTCC 232096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396135693583000