Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq11446 131 3e-25 seq15340 89.7 8e-13 seq10834 89.7 8e-13 >seq11446 Length=7882 Score = 131 bits (144), Expect = 3e-25 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || |||||| || | ||||||| | |||||||| |||||| || || |||| Sbjct 6659 CCTGCTTCCACCCATAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGT 6600 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | |||||||| |||||||| ||||||||||||| | | || || |||||||| |||| | Sbjct 6599 GGATGTTCAGGGACTGGCTCTGGTCGATGAAAGCCCCTCGGTCCGCGGCCATCTTGAGCA 6540 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 ||||||||| || |||||||| || |||||| Sbjct 6539 CGGTCTTCTGGGAGATCTCCCAGACGGTCTTG 6508 >seq15340 Length=28550 Score = 89.7 bits (98), Expect = 8e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 |||||||||||||||||||| ||| | ||| || | ||||| | ||||||||| Sbjct 8287 CTCCACGATCTCGGTGCACAGGTTGCTGCATTTGATGGTCCCCAGGTTCTGCTGGTTGCT 8346 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA 204999 ||| ||||| |||||||||||||| | |||| |||| | || ||||| |||| || Sbjct 8347 CTTCCGGTTGCAGGAGTCCTTGTAGAGCATGTACGGGGTCCCCGTCTCCGTCTGGGA 8403 >seq10834 Length=8617 Score = 89.7 bits (98), Expect = 8e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 |||||||||||||||||||| ||| | ||| || | ||||| | ||||||||| Sbjct 5628 CTCCACGATCTCGGTGCACAGGTTGCTGCATTTGATGGTCCCCAGGTTCTGCTGGTTGCT 5687 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA 204999 ||| ||||| |||||||||||||| | |||| |||| | || ||||| |||| || Sbjct 5688 CTTCCGGTTGCAGGAGTCCTTGTAGAGCATGTACGGGGTCCCCGTCTCCGTCTGGGA 5744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793251797240000