Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq16429 259 6e-64 seq2856 172 7e-38 seq20634 102 1e-16 seq38054 95.1 2e-14 seq10163 95.1 2e-14 seq547 89.7 7e-13 >seq16429 Length=58097 Score = 259 bits (286), Expect = 6e-64 Identities = 782/1199 (65%), Gaps = 18/1199 (2%) Strand=Plus/Minus Query 6959 GACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTT 7018 || ||||| | |||||||| | | |||||||| || |||| | || || | Sbjct 17080 GAGAGAGGCGCCACGTCCAGCAACAGGAGGTCTTGCACGTTTTCGGACTTGTCGCCTATC 17021 Query 7019 AAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTA 7078 | |||||| || || || | ||||| || || || || ||||||||||| || | || Sbjct 17020 AGGATGGCCGCCTGCACGGCAGCCCCATAGGCCACGGCTTCATCGGGGTTGATGCTCTTG 16961 Query 7079 TTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTC 7138 || || ||||| |||||||| | ||| |||| | || || || ||||| || || Sbjct 16960 TTGAGCTCTTTGCCGTTAAAGAAGTCCTGCAACAGCTTCTGGATCTTGGGGATCCGAGTG 16901 Query 7139 GATCCACCGACCAAAACGATTTCATTCA-CTTTCGATTTATCGATCTTTGAGTCTCGAAG 7197 || || || |||| || || ||||| | || || ||| || | ||| | || || | Sbjct 16900 GAGCCTCCCACCAGCACAATCTCATTGATCTGTCC-TTTGTCCAGCTTGGCATCACGCAA 16842 Query 7198 TGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACG 7257 | || || || || || | ||||| | ||| || |||||||| || Sbjct 16841 GGCCTTCTCCACCGGCTCGAGGGTGCCCCGGAAGAGGTCGGCGTTGAGCTCCTCAAAGCG 16782 Query 7258 TGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGT 7317 || ||||| ||||| || ||||| || | ||||| | | ||| || || || |||| Sbjct 16781 GGCCCGGGTGATGGACGTGTAGAAGTCGATCCCGTCAAACAGCGAGTCGATCTCGATGGA 16722 Query 7318 TGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACG 7377 | || | | || | || ||||| || | ||| || ||||| || | || || Sbjct 16721 GGCCTGGGTGGAGGAGCTGAGGGTGCGCTTGGCCCTCTCGCAGGCCGTGCGGAGCCGCCG 16662 Query 7378 AAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAA 7437 | ||| ||| ||| |||| || || ||| || || || || ||||| || || Sbjct 16661 GACGGCCCGCTTGTTGCCGGCGATGTCCCGCTTGTGCTTGCGCTTGAACTCCTCCACAAA 16602 Query 7438 GTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGC 7497 ||| | | | | ||||| || || || |||| ||| || ||||| || |||| Sbjct 16601 GTGGCTCACCATCCGGTTGTCGAAGTCCTCGCCGCCCAGGTGGGTGTCCCCGGCCGTCGA 16542 Query 7498 TTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACC 7557 || || || ||||| || | || ||| | || | || || || || || || || || Sbjct 16541 CTTCACCTCGAAGATGCCGTCCTCGATGGTCAAGATGGAGACGTCGAAGGTGCCGCCCCC 16482 Query 7558 CAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------TTCTTATCGAGACCGTA 7611 ||||||||| ||||| |||||| | || || | | ||||| || || ||||| Sbjct 16481 CAGGTCAAAGATGAGCACGTTCTTCTCCCCGGCCCCGCTGCCCTTCTTGTCCAGGCCGTA 16422 Query 7612 CGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAG 7670 ||||| || |||||||| || ||||| || || || || ||| || ||||| | || | Sbjct 16421 GGCGATGGCGGCCGCCGTGGGCTCATTGATGATGCGCAGGACA-TTGAGGCCGGTGATGG 16363 Query 7671 TTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGA 7730 | | || || || || || || || || || ||||| ||||||||||| || || | || Sbjct 16362 TGCCGGCGTCCTTGGTGGCCTGGCGCTGGGAGTCGTTGAAGTAGGCCGGCACAGTGATGA 16303 Query 7731 CCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAA 7790 | ||| | || || || || || | || ||||| || ||||| ||||| || | Sbjct 16302 CGGCGCTCTCCACCTTGCGGCCCAGGTAGGCCTCAGCGATCTCCTTCATCTTGGTGAGGA 16243 Query 7791 CCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCA 7849 |||| || || ||||| || | | | | || ||| || || || | || || || Sbjct 16242 CCATGGAGGAGATCTCCTCCG-GGAAGAAGGTCTTCTGCTCGCCCTTGTACTCGACCTCC 16184 Query 7850 ATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCT 7909 | | |||| || || | || | || | | ||| | ||||| || Sbjct 16183 ACCTTGGGCTTGCCC---CCCTCGCTCACCACGCGGAAGGGCCAGTGCTTCATGTCCGAC 16127 Query 7910 TGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTT 7969 ||||| |||| ||||| | ||||| || ||||| || || || | ||||| Sbjct 16126 TGGACGGTGCGGTCGTCGAACTTGCGCCCGATGAGGCGCTTGGCGTCGAAGATGGTGTTG 16067 Query 7970 TTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCC 8029 |||||||||||||| |||||||| |||||||| ||||| || || || | || Sbjct 16066 TTGGGGTTCATGGCCACCTGGTTCTTGGCCGCGTCGCCGATGAGGCGCTC---CGTGTCG 16010 Query 8030 GTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACG 8089 || || |||||||| ||||| || || || || |||||||| || || || || || Sbjct 16009 GTGAAGGCGACGTAGCTGGGGGTGGTGCGGTTGCCCTGGTCGTTGGCGATTATCTCCACC 15950 Query 8090 CGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||| || |||| || ||||| || || || || || | || || ||||| || Sbjct 15949 TTCCCGTGCTGGAAGACACCCACGCAGGAGTAAGTAGTGCCCAGGTCGATGCCGATGGC 15891 >seq2856 Length=189717 Score = 172 bits (190), Expect = 7e-38 Identities = 365/542 (67%), Gaps = 6/542 (1%) Strand=Plus/Plus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || ||||| ||||| || || || ||||| || | || |||||||| || || || || Sbjct 7670 GCGCCGTAAGCGACAGCTTCGTCAGGGTTGATGCTCTTGTTCAGTTCCTTGCCATTGAAG 7729 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 ||||| | | | || || || |||||||| || || || || |||| ||||| Sbjct 7730 AAATCCTGAAGGAGCTTCTGGATCTTGGGGATTCGGGTGGACCCGCCAACCAGGACGATG 7789 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 || | ||| | ||||| || | ||| | ||| || || | || || || || |||| | Sbjct 7790 TCGTGCACCTGAGATTTGTCCAGCTTGGCGTCCCGCAGGGCCTTCTCCACGGGATCCAGA 7849 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 ||||||||||| ||| || |||||||| || | ||||| || |||||| Sbjct 7850 GTGCCGCGGAACAAGTCGGCGTTCAGCTCTTCAAAACGAGCTCTTGTAATTGAGGTATAG 7909 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| ||| ||||| | ||||| || ||||| | | || | |||| || | Sbjct 7910 AAGTCAATGCCCTCGTACAGGGAATCGATCTCAATACTGGCCTGAGTGCTCGAGGACAGT 7969 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || ||||| || || || || | || || | ||| ||| ||| | Sbjct 7970 GTGCGCTTGGCCCGCTCGCAGGCGGTGCGGAGCCGGCGGACGGCCCGCTTGTTCTCACTG 8029 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAA 7456 || || ||||| ||||| || || ||||| || ||| || | || | | | | Sbjct 8030 ATGTCCTTCTTGTGTTTGCGCTTGAACTCAGCAATGAAATGATTGACCATGCGGTT---G 8086 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||| ||||||||||| || || || || || | || ||||||||||| || Sbjct 8087 TCAAAGTCTTCGCCACCCAAGTGGGTGTCGCCTGCCGTGGACTTCACTTCAAAGATGCCA 8146 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | | || ||||| || || ||||| || |||||||| || | ||| Sbjct 8147 TCCTCGATTGTGAGGATGGAGACATCGAAGGTGCCACCGCCGAGGTCAAAGATCAAGACG 8206 Query 7577 TT 7578 || Sbjct 8207 TT 8208 Score = 102 bits (112), Expect = 1e-16 Identities = 135/187 (72%), Gaps = 3/187 (2%) Strand=Plus/Plus Query 7956 CAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGAC 8015 ||||||||||||| |||||||||| || ||||||||| || || || |||||||| | Sbjct 9309 CAAAAACTGTGTTAGTGGGGTTCATTGCCACTTGGTTCTTTGCGGCATCACCGATAAGCC 9368 Query 8016 GTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCG 8075 ||| || || || || || ||||| ||| || |||| || || ||||| || | Sbjct 9369 TTTCGGTA---TCGGTGAAGGCAACGTAGCTTGGTGTGGTTCTGTTACCCTGGTCATTGG 9425 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 |||| ||||| || | | | ||| |||| || || || ||||| || || || | || Sbjct 9426 CAATGATTTCCACTTTGCCATGTTGGAAGACACCAACACAGGAATATGTGGTGCCAAGAT 9485 Query 8136 CAATACC 8142 |||| || Sbjct 9486 CAATCCC 9492 >seq20634 Length=1273 Score = 102 bits (112), Expect = 1e-16 Identities = 135/187 (72%), Gaps = 3/187 (2%) Strand=Plus/Minus Query 7956 CAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGAC 8015 ||||||||||||| |||||||||| || ||||||||| || || || |||||||| | Sbjct 594 CAAAAACTGTGTTAGTGGGGTTCATTGCCACTTGGTTCTTTGCGGCATCACCGATAAGCC 535 Query 8016 GTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCG 8075 ||| || || || || || ||||| ||| || |||| || || ||||| || | Sbjct 534 TTTCGGTA---TCGGTGAAGGCAACGTAGCTTGGTGTGGTTCTGTTACCCTGGTCATTGG 478 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 |||| ||||| || | | | ||| |||| || || || ||||| || || || | || Sbjct 477 CAATGATTTCCACTTTGCCATGTTGGAAGACACCAACACAGGAATATGTGGTGCCAAGAT 418 Query 8136 CAATACC 8142 |||| || Sbjct 417 CAATCCC 411 >seq38054 Length=1205 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/149 (75%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACA 7653 || ||||| || ||||| ||||| ||||| || || || ||||| || || ||||| ||| Sbjct 640 TTTTTATCCAGCCCGTAGGCGATGGCCGCAGCTGTAGGCTCATTGATGATGCGAAGTACA 581 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 || || || ||||| || | || || || || || || || || || ||||| ||||| Sbjct 580 -TTGAGACCTGCAATGGTACCGGCGTCCTTGGTGGCCTGCCGCTGGGAGTCGTTGAAGTA 522 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGA 7742 |||||||||||| | ||| || | |||| Sbjct 521 GGCCGGGACCGTAATGACAGCATTTGTGA 493 >seq10163 Length=210913 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/149 (75%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACA 7653 || ||||| || ||||| ||||| ||||| || || || ||||| || || ||||| ||| Sbjct 175001 TTTTTATCCAGCCCGTAGGCGATGGCCGCAGCTGTAGGCTCATTGATGATGCGAAGTACA 175060 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 || || || ||||| || | || || || || || || || || || ||||| ||||| Sbjct 175061 -TTGAGACCTGCAATGGTACCGGCGTCCTTGGTGGCCTGCCGCTGGGAGTCGTTGAAGTA 175119 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGA 7742 |||||||||||| | ||| || | |||| Sbjct 175120 GGCCGGGACCGTAATGACAGCATTTGTGA 175148 >seq547 Length=450765 Score = 89.7 bits (98), Expect = 7e-13 Identities = 237/359 (66%), Gaps = 6/359 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || || |||| ||| || || || ||||| || || ||||||||||| || Sbjct 354141 TCGAAGTCCTCCCCGCCCAGGTGAGTGTCTCCAGCGGTGGCCTTCACTTCAAAGATGCCG 354200 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || | | | || || || || || || || ||||||||||| ||||| | | Sbjct 354201 TCCTCGGCGGAGAGAACGGAGACGTCGAAAGTGCCCCCGCCCAGGTCAAAGATGAGGATG 354260 Query 7577 TT-CGTATC--GTCGTCTTTGTTCT---TATCGAGACCGTACGCGATAGCCGCCGCCGTT 7630 || || || | | || | ||| | | || || || ||||| ||||| |||||| Sbjct 354261 TTGCGGCTCCTGCCCTCGGGGCTCTTGGTGTTCAGGCCATAGGCGATGGCCGCTGCCGTT 354320 Query 7631 GGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCT 7690 |||||||| | || || | |||| || || | | || ||| | || || Sbjct 354321 GGTTCATTGAGGATCTTCAGGATCTGGAGGCTGGCGATGGCCCCGGCGTCTATGGTGGCC 354380 Query 7691 TGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTA 7750 || || || | ||||| ||||||||||| ||||| ||||| || | | ||| Sbjct 354381 TGGCGCTGGGCGTCGTTGAAGTAGGCCGGCACCGTGACGACGGCTTGGGAGACCGAGCAG 354440 Query 7751 CCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || || || || || || | | ||||| |||| || ||||| | || |||||||| Sbjct 354441 CCTAGGTAGGACTCGGCCGTCTGCTTCATCTTGGCCAGCACCATGGCCGAGATCTCTTC 354499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633612450860000