Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq2823 109 4e-19 seq12296 89.7 4e-13 seq6172 86.0 5e-12 >seq2823 Length=399890 Score = 109 bits (120), Expect = 4e-19 Identities = 146/206 (71%), Gaps = 14/206 (7%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || ||||| || || ||||| || | || || | |||| |||| ||| Sbjct 388498 TGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCACCCATCTTCCAGCTGC 388557 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || |||||||| |||| |||||| || | || ||||| ||||||||| Sbjct 388558 TTCCCTGCAAAGATCAGACGCTGCTGGT--------------TCCTTATCCTGAATTTTT 388603 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||||||| | || | |||||| | |||||| ||||| |||| ||||| || || Sbjct 388604 GCTTTTACATTCTCAATCGTGTCACTGGGTTCCACCTCAAGGGTGATTGTTTTCCCAGTC 388663 Query 101447 AAAGTTTTTACAAATATCTGCATGGT 101472 | ||||| ||||| ||||||||||| Sbjct 388664 AGGGTTTTCACAAAAATCTGCATGGT 388689 >seq12296 Length=1996970 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || | || || || | ||| ||||| ||||| || || || |||| || | | Sbjct 759258 CCTCCCCTCAGGCGCAACACAAGATGCAGGGTCGATTCCTTCTGGATTTTGTGGTCAGAG 759317 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | | || ||||| ||||| || ||||| |||| | |||||||||||| ||| Sbjct 759318 AGGGTGCGGCCGTCTTCCAACTGCTTGCCAGCAAAGATCAGCCTCTGTTGATCGGGAGGA 759377 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| || || || || ||||| || | | || | |||||| | ||| | Sbjct 759378 ATGCCCTCCTTGTCCTGGATTTTGGCCTTCATGTTCTCAATGGTGTCACTGGGCTCCGCC 759437 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | || ||||| |||| || || ||||| | |||||| Sbjct 759438 TCCAAGGTAATGGTCTTGCCAGTTAGGGTCTTCACAAAGACCTGCAT 759484 >seq6172 Length=309992 Score = 86.0 bits (94), Expect = 5e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 101366 CCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCA 101425 ||||| ||||| ||||||||| ||||||| | || | |||||| | |||||| ||| Sbjct 90343 CCTTCCTTATCCTGAATTTTTGCTTTTACATTCTCAATCGTGTCACTGGGTTCCACCTCA 90284 Query 101426 AGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || |||| ||||| || || | ||||| ||||| ||||||||||| Sbjct 90283 AGGGTGATTGTTTTCCCAGTCAGGGTTTTCACAAAAATCTGCATGGT 90237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395353523365500