Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq22841 170 2e-36 seq12307 170 2e-36 seq14593 152 6e-31 seq15281 132 6e-25 seq103532 111 2e-18 seq13445 111 2e-18 seq15340 105 8e-17 seq10834 105 8e-17 seq8961 100 3e-15 >seq22841 Length=9482 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| || ||||||||||| |||||||||||||| | | || Sbjct 3896 GCTTGGCCAGCTCCCCGGGCAGGAGGAGGCGCACGGCCGTCTGGATCTCGCGGGAGGTGA 3837 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| |||||||| | ||||||| |||| | Sbjct 3836 TGGTGGAGCGCTTGTTGTAGTGGGCCAGGCGGGAGGCCTCGGCGGCGATGCGCTCGAAGA 3777 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 3776 TGTCGTTCACGAAGGAGTTCATGATGCTCATGGCCTTGGACGAGATGCCCGTGTCCGGGT 3717 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 3716 GGACCTGCTTCAGCACCTTGTA 3695 >seq12307 Length=1140486 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| || ||||||||||| |||||||||||||| | | || Sbjct 702084 GCTTGGCCAGCTCCCCGGGCAGGAGGAGGCGCACGGCCGTCTGGATCTCGCGGGAGGTGA 702025 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| ||||||| | ||||||| |||| | Sbjct 702024 TGGTGGAGCGCTTGTTGTAGTGGGCCAGGCGGGAGGCCTCGCCGGCGATGCGCTCGAAGA 701965 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 701964 TGTCGTTGACGAAGGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCCGGGT 701905 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 701904 GGACCTGCTTCAGCACCTTGTA 701883 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| || ||||||||||| |||||||||||||| | | || Sbjct 779697 GCTTGGCCAGCTCCCCGGGCAGGAGGAGGCGCACGGCCGTCTGGATCTCGCGGGAGGTGA 779756 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| ||||||| | ||||||| |||| | Sbjct 779757 TGGTGGAGCGCTTGTTGTAGTGGGCCAGGCGGGAGGCCTCGCCGGCGATGCGCTCGAAGA 779816 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 779817 TGTCGTTGACGAAGGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCCGGGT 779876 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 779877 GGACCTGCTTCAGCACCTTGTA 779898 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| || ||||||||||| |||||||||||||| | | || Sbjct 826583 GCTTGGCCAGCTCCCCGGGCAGGAGGAGGCGCACGGCCGTCTGGATCTCGCGGGAGGTGA 826642 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| ||||||| | ||||||| |||| | Sbjct 826643 TGGTGGAGCGCTTGTTGTAGTGGGCCAGGCGGGAGGCCTCGCCGGCGATGCGCTCGAAGA 826702 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 826703 TGTCGTTGACGAAGGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCCGGGT 826762 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 826763 GGACCTGCTTCAGCACCTTGTA 826784 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| || ||||||||||| |||||||||||||| | | || Sbjct 802412 GCTTGGCCAGCTCCCCGGGCAGGAGGAGGCGCACGGCCGTCTGGATCTCGCGGGAGGTGA 802353 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| |||| |||| |||||| | ||||||| |||| | Sbjct 802352 TGGTGGAGCGCTTGTTGTAGTGGGCCAAACGGGAGGCCTCAGCAGCGATGCGCTCGAAGA 802293 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 802292 TGTCGTTGACGAAGGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCCGGGT 802233 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||| ||||| Sbjct 802232 GGACCTGCTTCAGCACTTTGTA 802211 Score = 152 bits (168), Expect = 6e-31 Identities = 155/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||| |||||||||||||| | | || Sbjct 822473 GCTTGGCCAGCTCCCCGGGCAGCAGGAGGCGCACGGCCGTCTGGATCTCGCGGGAGGTGA 822414 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| |||||| | ||||||| |||| | Sbjct 822413 TGGTGGAGCGCTTGTTGTAGTGGGCCAGGCGGGAGGCCTCTGCAGCGATGCGCTCGAAGA 822354 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || || ||||||| ||| | |||| ||||||||| ||| |||| Sbjct 822353 TGTCATTGACGAAGGAATTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCCGGGT 822294 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 822293 GGACCTGCTTCAGCACCTTGTA 822272 Score = 149 bits (164), Expect = 8e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| || ||||||||||| |||||||||||||| | | || Sbjct 38088 GCTTGGCCAGCTCCCCGGGCAGGAGGAGGCGCACGGCCGTCTGGATCTCGCGGGAGGTGA 38029 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| ||| || | ||| ||||| | Sbjct 38028 TGGTGGAGCGCTTGTTGTAGTGGGCCAGGCGGGAGGCGAAGGAGTTCATGATGTCGAAGA 37969 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| ||| |||| Sbjct 37968 TGTCGTTGACGAAGGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCCGGGT 37909 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 37908 GGACCTGCTTCAGCACCTTGTA 37887 >seq14593 Length=678005 Score = 152 bits (168), Expect = 6e-31 Identities = 158/206 (77%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||| ||||||||||| || | | || Sbjct 243727 GCTTGGCCAGCTCCCCGGGCAGCAGGAGGCGCACGGCCGTCTGGATCTCACGGGAGGTGA 243668 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| ||||| ||| |||||||||| |||||| |||| | Sbjct 243667 TGATGGAGCGCTTGTTGTAGTGGGCCAGGCGGGAGGCCTCGGTGGCGATGCACTCGAAGA 243608 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||| || || |||||||||| ||| | |||| ||||||| || ||| |||| Sbjct 243607 TGTTGTTCACGAAGGAGTTCATGATGCTCATGGCCTTGGAGGAGATG--CAGGTCCGGGT 243550 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| ||||||||||| ||| Sbjct 243549 GGACCTGCTTCAGCACCTTGTACATG 243524 >seq15281 Length=78924 Score = 132 bits (146), Expect = 6e-25 Identities = 135/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 1254369 AGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCC 1254428 || ||||| || ||||||||||| || | | ||| ||| ||||||||| | || ||| Sbjct 60625 AGACGCACCGCCGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAATGGGCC 60566 Query 1254429 AGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACC 1254488 || ||| |||||| | ||||||| |||| ||||||||||| || |||||||||| | Sbjct 60565 AGGCGGGAGGCCTCCCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCATGATC 60506 Query 1254489 GACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 ||| | |||| |||||||| ||||||||| ||||||||||| || ||||| Sbjct 60505 CCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGGACCTGCTTGAGGACTTTGTA 60450 Score = 129 bits (142), Expect = 7e-24 Identities = 134/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 1254369 AGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCC 1254428 || ||||| || ||||||||||| || | | ||| ||| ||||||||| | || ||| Sbjct 34100 AGACGCACCGCCGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAATGGGCC 34159 Query 1254429 AGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACC 1254488 || ||| |||||| | ||||||| |||| ||||||||||| || |||||||||| Sbjct 34160 AGGCGGGAGGCCTCCCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCATGATG 34219 Query 1254489 GACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 ||| | ||| |||||||| ||||||||| ||||||||||| |||||||| Sbjct 34220 CTCATGGCTTTGGAAGAGATGCCGGTGTCGGGGTGGACCTGCTTGAGGACCTTGTA 34275 >seq103532 Length=427 Score = 111 bits (122), Expect = 2e-18 Identities = 94/114 (82%), Gaps = 4/114 (4%) Strand=Plus/Minus Query 512050 CGTCATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACAC 512109 ||||||||||||||||||| ||||||||||| |||||||||| || ||| | |||||| Sbjct 172 CGTCATCTCCTTTGACGGCTCCTACGTCAACTACCGCCACTTGGCCCTGCTCTGCGACAC 113 Query 512110 CATGTGCTGCCGCGG--ATCGGTGGTGGCCGTCACGCGCCACGGCTTCAACCGC 512161 |||| |||||||| ||| | ||||| |||| ||||||||| |||||||| Sbjct 112 CATGACGTGCCGCGGGCATC--TAATGGCCATCACTCGCCACGGCGTCAACCGC 61 >seq13445 Length=630170 Score = 111 bits (122), Expect = 2e-18 Identities = 94/114 (82%), Gaps = 4/114 (4%) Strand=Plus/Minus Query 512050 CGTCATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACAC 512109 ||||||||||||||||||| ||||||||||| |||||||||| || ||| | |||||| Sbjct 622135 CGTCATCTCCTTTGACGGCTCCTACGTCAACTACCGCCACTTGGCCCTGCTCTGCGACAC 622076 Query 512110 CATGTGCTGCCGCGG--ATCGGTGGTGGCCGTCACGCGCCACGGCTTCAACCGC 512161 |||| |||||||| ||| | ||||| |||| ||||||||| |||||||| Sbjct 622075 CATGACGTGCCGCGGGCATC--TAATGGCCATCACTCGCCACGGCGTCAACCGC 622024 >seq15340 Length=28550 Score = 105 bits (116), Expect = 8e-17 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 1628167 ACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTC 1628226 ||||||||||||||||||||| | | | || |||||||||||||||||| | || Sbjct 8291 ACGATCTCGGTGCACAGGTTGCTGCATTTGATGGTCCCCAGGTTCTGCTGGTTGCTCTTC 8350 Query 1628227 AGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACG 1628286 ||||| || |||||||| ||||||||| || | || ||||| |||| | | ||| | Sbjct 8351 CGGTTGCAGGAGTCCTTGTAGAGCATGTACGGGGTCCCCGTCTCCGTCTGGGACTCGATG 8410 Query 1628287 ATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCC 1628334 ||||| |||| | ||| | || ||| || | ||| |||||||| Sbjct 8411 ATGGCGTACCACAGCTGCTGGGCTTTCACCACCTTGCGCACGCGGCCC 8458 Score = 96.9 bits (106), Expect = 4e-14 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 1628433 GGTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGC 1628492 |||| || ||||| ||| || || || |||| || ||||| |||||||| || || Sbjct 12858 GGTCTCCACGCGGTTCATGAAAAGATCCGGGATCCAGAGGGCGTAGAAGAGGTCCCGGGC 12917 Query 1628493 CCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTG 1628552 || | ||||||||| ||| ||| || || |||||||| | || | |||||| || Sbjct 12918 ACGCTGCTCCTCCTTCCCGGTGTTTTTCTTCAGGTCGAGGAACTCAAAGATGTCGAAATG 12977 Query 1628553 CCACGGCTCCAGGTAGCAGGCAAAGGCGCCC 1628583 ||| |||||||||||| ||||||||| ||| Sbjct 12978 CCAGGGCTCCAGGTAGATGGCAAAGGCCCCC 13008 Score = 95.1 bits (104), Expect = 1e-13 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 1630177 GCAAAGCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAG 1630236 |||| |||||| || ||||| |||||||||||||||||||| || || || ||||||||| Sbjct 13946 GCAACGCCGATTCCACCGGCGGACTTGGAGATGAGCGCGCAGTGCTTCAGTGTGTCGTAG 14005 Query 1630237 ATGCCCTCGATCGAGTCGGCCTTCATG 1630263 || || ||||| |||| |||||||| Sbjct 14006 ATCCCTTCGATGCTGTCGTCCTTCATG 14032 >seq10834 Length=8617 Score = 105 bits (116), Expect = 8e-17 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 1628167 ACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTC 1628226 ||||||||||||||||||||| | | | || |||||||||||||||||| | || Sbjct 5632 ACGATCTCGGTGCACAGGTTGCTGCATTTGATGGTCCCCAGGTTCTGCTGGTTGCTCTTC 5691 Query 1628227 AGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACG 1628286 ||||| || |||||||| ||||||||| || | || ||||| |||| | | ||| | Sbjct 5692 CGGTTGCAGGAGTCCTTGTAGAGCATGTACGGGGTCCCCGTCTCCGTCTGGGACTCGATG 5751 Query 1628287 ATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCC 1628334 ||||| |||| | ||| | || ||| || | ||| |||||||| Sbjct 5752 ATGGCGTACCACAGCTGCTGGGCTTTCACCACCTTGCGCACGCGGCCC 5799 >seq8961 Length=1683347 Score = 100 bits (110), Expect = 3e-15 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 1254369 AGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCC 1254428 |||| ||| |||||||||||||| | | | ||| || ||||||||| | || ||| Sbjct 628960 AGGCACACAGCGGTCTGGATCTCATGGGAGGTGATGATGGAGCGCTTGTTGTAATGGGCC 628901 Query 1254429 AGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACC 1254488 || || |||||||| ||||||| |||| ||||| |||| || ||||||||| Sbjct 628900 AGGTGGGAGGCCTCGGCAGCGATGCGCTCGAAAATGTCATTGATGAAGGAGTTCATGGTG 628841 Query 1254489 GACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||| | |||| ||||||||| || ||||| |||||||| ||||| Sbjct 628840 CTCATGGTCTTGGAGGAGATGCCGGTATCTGGGTGGACCTGCTTCAGCAC 628791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6091423813205500