Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq1216 87.8 2e-12 >seq1216 Length=204033 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 32960 GATGCAGTTTCATTTAGCAATAGGTCATACAGCAATGTCTATATATATAGATTGTCCGTT 33019 ||| || || ||| | | || || || ||||| | ||||| || || |||||||| || Sbjct 95863 GATACAATTCCATGTGACTATTGGCCACACAGCTTTTTCTATTTACATTGATTGTCCTTT 95804 Query 33020 CCCTAGATGGATACAGTGGGCTGTTATTATATATTCTATCACCTTTATCATCCTTTTTGG 33079 |||| |||||| || ||| ||| ||| | ||| ||| | | ||||| ||||||||||| Sbjct 95803 TCCTAAATGGATGCATTGGAGTGTCATTTTCTATGCTACCTCTTTTATTATCCTTTTTGG 95744 Query 33080 CAACTTTTA-TCTCAGGACATATAA 33103 ||||| || | || ||||||| || Sbjct 95743 TAACTTCTACTATC-GGACATACAA 95720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 601736935960000