Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq7367 123 3e-23 seq1775 98.7 1e-15 >seq7367 Length=755130 Score = 123 bits (136), Expect = 3e-23 Identities = 254/368 (69%), Gaps = 16/368 (4%) Strand=Plus/Plus Query 13695 TTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTCCTG 13754 || ||| |||||||| || |||||| | | ||| || |||||||| || | Sbjct 135599 TTCCCCCTCGCCTACGTCCTCACCATCCACAAGGACTTCGGGACCTTCGAGCGGGTCTTC 135658 Query 13755 AGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTC--CGGCG 13812 ||||| ||||||| || || ||| |||||||||||||||||||| ||| | |||| Sbjct 135659 CGGGCCCTCTACGCGCCCCACAACGTCTACTGCGTCCACGTGGACGAGAAGGCGCCGGC- 135717 Query 13813 ACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGG--TGCTTCCCTAACGTGGCCCTGGC 13870 || |||| |||| || || | | | || |||||||| |||| || ||| Sbjct 135718 -CGGCTTCAAGCGGGCGGTG--GGGCGCCTGCTGGACTGCTTCCCCAACGCCTTCCCGGC 135774 Query 13871 CCACCGGCTGCACGAC---GTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAG 13927 | |||| || ||| ||||| |||| | | ||| | ||||||||||| | Sbjct 135775 CTCCCGG--GC-CGAGCCGGTGGTCTACGCCGGCATCTCCCGCCTCCAGGCCGACCTGAA 135831 Query 13928 CTGCATGTCGGACCTG-GACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCG 13986 ||||||| ||||||| | || |||| |||| |||| |||||| |||||| |||||| Sbjct 135832 CTGCATGGGGGACCTGCGGCG-CTCCGGCGTCCGGTGGGAGTACCTCCTCAACATGTGCG 135890 Query 13987 GGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCTGGGCG 14046 || ||||||||| | | |||||||| |||||| || || |||||| | | | | Sbjct 135891 GGCAGGACTTCCCCTTGAGGACCAACCGGGAGATGGTCCGCCACCTGAAGCGCTTTCGGG 135950 Query 14047 GCAAGAAC 14054 | |||||| Sbjct 135951 GGAAGAAC 135958 >seq1775 Length=229576 Score = 98.7 bits (108), Expect = 1e-15 Identities = 291/441 (66%), Gaps = 16/441 (4%) Strand=Plus/Minus Query 13606 GAGACTACGTGAACATGACGGCCGACTGCGTGGCCTTCGTGAAAGA---CAGGGGGTATC 13662 |||| ||| |||||||||| ||||| | |||| ||||| |||| |||| Sbjct 42336 GAGATTACCTGAACATGACCCAGAACTGCAGGCTCTTC---AAAGAGAGCAGGAGGTACA 42280 Query 13663 TCGTGAGGCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCC 13722 || || |||||| || || | || || ||||| || || || || ||||||| Sbjct 42279 TCCAATTCCCGCTGAGCAACGAGGAAGAAGACTTCCCCATTGCTTATTCCATGGTGATCC 42220 Query 13723 ACCACAAGATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCT 13782 || | ||||||| ||||| ||| | || || ||||||||||||| ||||| || Sbjct 42219 ACAATCAGATCGAAATGTTTGAGAAGTTGTTGCGGTCCATCTACGCCCCTCAGAATGCCT 42160 Query 13783 ACTGCGTCCACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCG-GCCATC 13841 ||||| ||||||| ||| |||||| | | |||| | |||| || | ||| Sbjct 42159 ACTGCATCCACGTAGACGAGAAGTCCTCCAAACCTTTCA-AAGAGGCGGTGCGAGGCATT 42101 Query 13842 GCCAGGTGCTTCCCTAACGTGGCCCTGGCCCACC--GGCTGCACGACGTGGTGTACGGCT 13899 ||| ||||| || || | || | || | |||| | |||||||| | || Sbjct 42100 GCCTCCTGCTTTGACAA--TGTCTTTGTCGCATCTAAGCTGGAATCAGTGGTGTATGCCT 42043 Query 13900 CCTGGAGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCT--GGACGCCTCCCCCGT 13957 | ||| | || || |||||||| | ||||||| ||||| || | | || Sbjct 42042 CGTGGTCCAGGGTTCAAGCCGACCTGAACTGCATGGAAGACCTCCTGAAG--AGCAAAGT 41985 Query 13958 CAAGTGGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGA 14017 |||||| |||||| || ||| || |||| || ||||| ||||||||||| ||| Sbjct 41984 TCAGTGGAAGTACCTCCTGAACACCTGTGGGACCGATTTCCCCATCAAGACCAACGCGGA 41925 Query 14018 GATCGTGCGGGCGCTGAAGGC 14038 |||||| || | ||||| || Sbjct 41924 GATCGTCCGCGTCCTGAAAGC 41904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657162343040000