Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq15656 98.7 7e-16 >seq15656 Length=1245196 Score = 98.7 bits (108), Expect = 7e-16 Identities = 127/174 (73%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 27488 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGT 27547 |||| || |||| || ||||| ||||| ||||||||||| || || || || |||| || Sbjct 956201 TCATATCTTTGTATTCCGCTCCAAAATGTCTCCATTGGAAACCATAAACTGGACCCAAGT 956260 Query 27548 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607 | || ||||| || |||| ||| ||||| || || || | ||||| ||||| | Sbjct 956261 CCCCTTCTTCTCTAGAAACGAAACCCTGTTTGTCTAAGAATTCACGAGAACCATTGGCAT 956320 Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGT-GGACCCTCTG 27660 |||||||| | || || || | || |||||||| | ||||| | ||||| || Sbjct 956321 CCCAGATCCTGACACCTTTAGCAGAAAGCTCTTTTGCATTTGTAGAACCCTGTG 956374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 368644804836500