Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq7398 147 5e-30 seq4607 145 2e-29 seq12296 134 3e-26 >seq7398 Length=384992 Score = 147 bits (162), Expect = 5e-30 Identities = 175/235 (74%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 177909 AAGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAG 177968 ||| | ||||||| | || |||||||| || | | || ||||| || ||||| ||| Sbjct 232197 AAGTTCAAAATGC---AGATCTTCGTGAAGACCTTGAATGGCAAAACCATTACCCTGGAG 232141 Query 177969 GTGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAA 178026 ||||| || ||| ||||||| |||||||| || ||||| ||||||||||| || | Sbjct 232140 GTGGA--GCCCAGTGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCA 232083 Query 178027 TCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTC 178086 ||||||| |||||||| |||| || || ||||| || ||||| |||||||| | || | Sbjct 232082 TCCCTCCTGACCAGCAGAGACTGATGTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCC 232023 Query 178087 TTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 | | || || ||| |||| || || || || || |||||||| ||| | || || Sbjct 232022 TCTCTGACTACAACATCCAGAAGGAGTCCACCCTCCATCTTGTGTTGCGCCTGAG 231968 >seq4607 Length=116780 Score = 145 bits (160), Expect = 2e-29 Identities = 164/217 (76%), Gaps = 7/217 (3%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || |||||||| || | || || ||||| || ||||| |||||||| Sbjct 8138 AAAATGC---AGATCTTCGTGAAGACCTTGACTGGCAAAACCATTACCCTGGAGGTGGA- 8193 Query 177975 AGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTC 178032 || ||| ||||||| |||||||| || ||||| ||||||||||| || ||||||| Sbjct 8194 -GCCCAGTGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTC 8252 Query 178033 CGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG 178092 | |||||||| | || ||||| ||||| || ||||| |||||||| | || || | | Sbjct 8253 CCGACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTG 8312 Query 178093 ATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | || ||| |||| || || || || || |||||||| Sbjct 8313 ACTACAACATCCAGAAGGAGTCCACCCTCCATCTTGT 8349 Score = 145 bits (160), Expect = 2e-29 Identities = 158/208 (76%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || ||||| || || || || ||| | |||||||| || ||| Sbjct 8372 CAGATCTTCGTGAAGACCCTCACTGGCAAGACCATTACCTTGGAGGTGGA--GCCCAGTG 8429 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||| || ||||| ||||||||||| || |||||||| ||||||| Sbjct 8430 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCCGACCAGC 8489 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| ||||| || ||||| |||||||| | || || | || || ||| Sbjct 8490 AGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTGACTACAACA 8549 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || |||||||| Sbjct 8550 TCCAGAAGGAGTCCACCCTCCATCTTGT 8577 Score = 145 bits (160), Expect = 2e-29 Identities = 158/208 (76%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || | || || ||||| || ||||| |||||||| || ||| Sbjct 9284 CAGATCTTCGTGAAGACCTTGACTGGCAAAACCATTACCCTGGAGGTGGA--GCCCAGTG 9341 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||| || ||||| ||||||||||| || |||||||| ||||||| Sbjct 9342 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCCGACCAGC 9401 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| ||||| || ||||| |||||||| | || || | || || ||| Sbjct 9402 AGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTGACTACAACA 9461 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || |||||||| Sbjct 9462 TCCAGAAGGAGTCCACCCTCCATCTTGT 9489 Score = 140 bits (154), Expect = 8e-28 Identities = 157/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || ||||| || || || || ||||| |||||||| || ||| Sbjct 8600 CAGATCTTCGTGAAGACCCTCACTGGCAAGACCATTACCCTGGAGGTGGA--GCCCAGTG 8657 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||| || ||||| ||||||||||| || |||||||| ||||||| Sbjct 8658 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCCGACCAGC 8717 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | | || | || || ||| Sbjct 8718 AGAGGCTGATCTTTGCAGGCAAGCAGCTTGAAGATGGCCGCCCCCTCTCTGACTACAACA 8777 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || |||||||| Sbjct 8778 TCCAGAAGGAGTCCACCCTCCATCTTGT 8805 Score = 140 bits (154), Expect = 8e-28 Identities = 157/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || ||||| || || || || ||| | |||||||| || ||| Sbjct 9056 CAGATCTTTGTGAAGACCCTCACTGGCAAGACCATTACCTTGGAGGTGGA--GCCCAGTG 9113 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||| || ||||| ||||||||||| || |||||||| ||||||| Sbjct 9114 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCTGACCAGC 9173 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | |||| || || ||||| || ||||| |||||||| | || || | || || ||| Sbjct 9174 AGAGACTGATGTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTGACTACAACA 9233 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || |||||||| Sbjct 9234 TCCAGAAGGAGTCCACCCTCCATCTTGT 9261 Score = 140 bits (154), Expect = 8e-28 Identities = 157/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || ||||| || || || || ||| | |||||||| || ||| Sbjct 9512 CAGATCTTTGTGAAGACCCTCACTGGCAAGACCATTACCTTGGAGGTGGA--GCCCAGTG 9569 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||| || ||||| ||||||||||| || |||||||| ||||||| Sbjct 9570 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCTGACCAGC 9629 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | |||| || || ||||| || ||||| |||||||| | || || | || || ||| Sbjct 9630 AGAGACTGATGTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTGACTACAACA 9689 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || |||||||| Sbjct 9690 TCCAGAAGGAGTCCACCCTCCATCTTGT 9717 Score = 140 bits (154), Expect = 8e-28 Identities = 157/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || ||||| || || || || ||| | |||||||| || ||| Sbjct 9740 CAGATCTTTGTGAAGACCCTCACTGGCAAGACCATTACCTTGGAGGTGGA--GCCCAGTG 9797 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||| || ||||| ||||||||||| || |||||||| ||||||| Sbjct 9798 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCTGACCAGC 9857 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | |||| || || ||||| || ||||| |||||||| | || || | || || ||| Sbjct 9858 AGAGACTGATGTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTGACTACAACA 9917 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || |||||||| Sbjct 9918 TCCAGAAGGAGTCCACCCTCCATCTTGT 9945 Score = 140 bits (154), Expect = 8e-28 Identities = 164/220 (75%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || | || || ||||| || ||||| |||||||| || ||| Sbjct 10196 CAGATCTTTGTGAAGACCTTGACTGGCAAAACCATTACCCTGGAGGTGGA--GCCCAGTG 10253 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||| || ||||| ||||||||||| || |||||||| ||||||| Sbjct 10254 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCCGACCAGC 10313 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | || || | || || ||| Sbjct 10314 AGAGGCTGATCTTTGCAGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTGACTACAACA 10373 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 |||| || || || || || |||||||| ||| | || || Sbjct 10374 TCCAGAAGGAGTCCACCCTCCATCTTGTGTTGCGCCTGAG 10413 Score = 136 bits (150), Expect = 9e-27 Identities = 156/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || ||||| || || || || ||| | |||||||| || ||| Sbjct 8828 CAGATCTTTGTGAAGACCCTCACTGGCAAGACCATTACCTTGGAGGTGGA--GCCCAGTG 8885 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||| || ||||| ||||||||||| || |||||||| ||||||| Sbjct 8886 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCCGACCAGC 8945 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | || || | || || ||| Sbjct 8946 AGAGGCTGATCTTTGCAGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTGACTACAACA 9005 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || |||||||| Sbjct 9006 TCCAGAAGGAGTCCACCCTCCATCTTGT 9033 Score = 136 bits (150), Expect = 9e-27 Identities = 156/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || ||||| || || || || ||| | |||||||| || ||| Sbjct 9968 CAGATCTTTGTGAAGACCCTCACTGGCAAGACCATTACCTTGGAGGTGGA--GCCCAGTG 10025 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||| || ||||| ||||||||||| || |||||||| ||||||| Sbjct 10026 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCCGACCAGC 10085 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | || || | || || ||| Sbjct 10086 AGAGGCTGATCTTTGCAGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTGACTACAACA 10145 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || |||||||| Sbjct 10146 TCCAGAAGGAGTCCACCCTCCATCTTGT 10173 >seq12296 Length=1996970 Score = 134 bits (148), Expect = 3e-26 Identities = 163/220 (74%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || || ||||| || || |||||||| |||| ||| || ||| Sbjct 759253 CAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGCGGA--GCCCAGTG 759196 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||| ||| ||||| ||||| ||||| || ||||| | ||||||| Sbjct 759195 ACACCATTGAGAACGTGAAAGCCAAGATCCAGGATAAAGAGGGCATCCCCTCTGACCAGC 759136 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || ||||| || || || ||| | ||||| || | || || | || || ||| Sbjct 759135 GGAGGCTGATCTTTGCTGGCAAGCAGTTGGAAGACGGCCGCACCCTCCCTGACTACAACA 759076 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 |||| || ||||| || ||||||||||| ||| | ||||| Sbjct 759075 TCCAGAAGGAATCCACCCTGCATCTTGTGTTGCGTCTCAG 759036 Score = 93.3 bits (102), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG--ACACCA 177987 || ||||| || || || || || || || ||| | |||| ||| || ||| |||||| Sbjct 759475 TTTGTGAAGACCCTAACTGGCAAGACCATTACCTTGGAGGCGGA--GCCCAGTGACACCA 759418 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 | |||||| | || || || |||||||| || || || ||||| || || || | | Sbjct 759417 TTGAGAACATGAAGGCCAAAATCCAGGACAAGGAGGGCATTCCTCCCGATCAACAGAGGC 759358 Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107 | ||||| || || || ||| | ||||| || | || || | || | || |||| | Sbjct 759357 TGATCTTTGCTGGCAAGCAGTTGGAAGACGGCCGCACCCTCTCTGACCACAAAATCCAGA 759298 Query 178108 AAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 | ||||| || ||||||||||| ||| | || || Sbjct 759297 AGGAATCGACCCTGCATCTTGTGTTGCGCCTGAG 759264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1200777732651000